Taeniopygia guttata (zebra finch): 100221039
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Entry
100221039 CDS
T01082
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
tgu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100221039 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100221039 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100221039 (SNW1)
Spliceosome [BR:
tgu03041
]
Complex B
Other components
Prp19-related factors
100221039 (SNW1)
Complex C
100221039 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
100221039
NCBI-ProteinID:
XP_002200578
Ensembl:
ENSTGUG00000012340
UniProt:
A0A674H4B1
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Position
5:complement(40488835..40508016)
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AA seq
538 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLELEERARAQRSRQAALVSSRREPPPYGYRKGWIPRALEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIREITEKTRAALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRPSNEIQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSN
SDRNTRGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHESKKRRKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaacccagctgtcccaagatcagctagaacta
gaagaaagagcaagagctcagagatccaggcaggctgctctggtctcctcgagaagggaa
cctcccccatacggttaccggaaaggatggatacctcgtgcactagaggattttggagat
gggggtgctttcccagaaattcatgtggcccaatacccactggatatgggccggaagaag
aaaatgtccaatgctttggctgttcaggtggatgcagaaggaaaaataaaatacgatgca
attgctcgacaaggacagtcaaaggacaaggttatttacagcaagtacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcccgaactgcaaagaccagatgaggaggcaatt
agagagataacagagaagacaagagcagccttggagaaatcagtctcccaaaaagttgca
gcagccatgccagttcgagctgctgacaaactagctcctgcacagtacattcggtacaca
ccatctcagcaaggagttgcattcaactctggagcaaaacagagagttattcggatggtg
gaaatgcagaaggaccctatggagcctccgagattcaaaattaacaagaaaattccacga
ggaccaccatctcctccagcacctgtaatgcactctccaagtagaaagatgactgtgaaa
gagcagcaagagtggaaaattcctccatgcatttcaaactggaaaaatgcaaagggttac
accattccattagataaacgtctggctgcagatggcagaggattgcagactgtccatatt
aatgaaaactttgccaaacttgctgaggcgctctatattgctgacagaaaggctcgtgag
gcagtagagatgcgtgcccaggtggagaggaagatggctcagaaagaaaaagagaaacac
gaggaaaagctccgagaaatggctcagaaagccagggagagaagagcagggatcaaaacc
catgttgaaaaagaggatggcgaagctagagaaagagatgaaatcagacatgacaggcgc
aaagagagacagcatgacagaaacctttcccgggcagctccagataaaaggtcaaagctg
caaagaaatgagaacagagatattagtgaagttattgccctgggggtaccaaaccccagg
ccatccaatgaaatccagtatgaccagaggctgttcaaccagagcaagggtatggacagt
ggctttgctggaggagaggatgaaatttataatgtttatgaccagccttggagaagtggc
aaggatatggcccaaaacatctacaggccaagtaaaaatctggataaggacatgtatggt
gatgatctagaggctcgaataaagaccaacaggtttgttcctgacaaagagttttctaac
tctgatcgtaacaccagaggcaggggcagagatggaccagttcagtttgaggaggatcca
tttggtttggacaagtttctggaagaagctaagcaacatggtggttctaaacggccatca
gacagcagccgccctaaggaacatgagcatgagagcaagaagaggaggaaggactga
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