Taeniopygia guttata (zebra finch): 100221052
Help
Entry
100221052 CDS
T01082
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100221052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRR_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100221052
NCBI-ProteinID:
XP_030113557
UniProt:
H0ZTM2
LinkDB
All DBs
Position
1:4367025..4377947
Genome browser
AA seq
675 aa
AA seq
DB search
MKLYIIFFLAVVNKQTSNYQPPEGTSCEMANSQAFCHNKDLHQIPRELYPNVKKIDLSGN
LIQSISEMSSSFYTSLQCLDLSSNQISFITPGVFAHMKSLLEINLANNHLYELAQNGTEG
IGLLPKVEVLDLSHNNLYNGMAEYFIKEAPALQYLSLADNSIIMISQKMFEGSPNLVEID
LQSNIIMEIEEGAFETLVSLSKLNLSKNSITCISDFNLRHLEILDLSRNSIETFHTTKSD
DEYSLRCLDLSENKLFHFPVFPQVNKLVTLNLSKNLIQLTAESPHNKMDYVKNEWLNASF
HLLDQKQSRNKSSLYLSQLVYLDLSYNEIKSIPEEFFESMLSLHTLNLSKNCLQAFAVSY
DSALISLTVLDLSYNALQNLLLDAGALSNLKELYIQNNYLQTLQFDIFSNLPSLRLLNLQ
SNNISLCSMYSGLAKQRLAGEESGCVSFVNSPTLQYLFLADNMLNILPAYSFYKTPLVVL
DLSMNPGLKIELKALSGLEKSLECLYLYGNSLIELNIDLPCFSHLKHLNLSENQLNWLPK
WSSDSPLEVLDLRNNRFSTLQNSNILALENSLKNLYLTGNPLNCCGNIWLSSMIQNKNVQ
IPNVEHLTCQHSPNFGYQDKMHIGNIRPEDCEKEDLKKINFLIILTFVLVLSVIIIGVGS
YFCFRRQNFSHQFKA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtacatcatcttcttcctggcagtggtgaataaacaaacctctaactaccaa
ccccctgaggggacatcctgtgaaatggcaaactctcaggcattttgccacaacaaagat
ctccaccaaatccctcgtgagctctatccaaatgtaaaaaaaatagatctgtcgggaaat
ctgattcaaagcatttctgaaatgtcatcatcattttacacttcccttcagtgcctggat
ttaagctctaaccagataagtttcatcacgcctggagtcttcgcacacatgaagagtttg
ctggaaataaatttagccaacaatcacttgtatgagcttgctcaaaatggcacagagggg
attggactcctacccaaggtggaagtactggacttgtcccacaataatctgtacaatggg
atggctgagtatttcattaaagaagctccagcgctgcagtatctgtccttggcagacaac
agtattataatgatatcacaaaagatgtttgagggatctcccaatcttgtggagatagat
cttcagagcaacatcatcatggaaatagaagaaggtgcttttgagaccctagtgagcctg
tccaaactcaatctctcaaagaattcaattacttgcatctctgattttaatctcaggcat
ctggagatacttgaccttagcaggaatagcattgagactttccacaccacaaaatcagat
gatgaatatagcttaaggtgtttggatctgagtgaaaacaaactgtttcatttcccagtg
ttccctcaggtaaataaactggtaactctgaatttatcaaagaatttaatccagctcact
gctgaatcccctcacaataaaatggactatgtgaaaaatgaatggctaaatgcttctttc
catcttcttgatcagaagcaaagtagaaacaaaagttctctttatttatcccagcttgta
tatttagacttaagttataatgaaatcaaatccattccagaggagttctttgaatcaatg
ttgtcccttcacacccttaatctcagtaaaaactgtcttcaggcatttgcagtaagttat
gacagtgcattgatctctttgactgtccttgacttgagctacaatgctttgcagaacctt
ctccttgatgctggtgcgctgtcaaatttgaaggagctctatattcaaaacaattatctt
caaacactgcagtttgacatcttctccaatcttcctagccttagactgcttaatctacaa
agcaataatatcagcctttgcagcatgtactcagggttagctaagcaaagacttgctgga
gaggaaagtggttgtgtatcatttgtcaattctcctactcttcagtacttgttcctagct
gacaacatgctgaacatcctaccagcatacagcttctacaagactcctctggttgtcttg
gacctctccatgaaccctggactgaaaatagaacttaaagcattatcaggtctggaaaag
tctctggaatgtttgtatttatatggtaatagcctgatagaattaaatattgacttgcct
tgttttagtcaccttaaacatttaaacctctctgaaaatcagctgaactggctgcctaag
tggagtagtgactctccactagaagttctggacctacggaacaacaggttcagtacatta
cagaacagcaatattttagcattagaaaattcacttaaaaacttgtatctcaccgggaac
ccactcaactgctgtggaaacatctggctttcatccatgatccagaacaaaaatgtccag
atccccaacgtggagcatttaacgtgccagcacagtccgaattttgggtaccaggacaaa
atgcacattgggaacattagaccagaagactgtgaaaaagaggatctgaagaaaatcaac
ttccttattatattaacatttgtgttggttttatctgtgatcatcattggtgtgggttca
tatttttgcttccgcaggcaaaactttagccatcagtttaaagcatag
DBGET
integrated database retrieval system
