Taeniopygia guttata (zebra finch): 100221134
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Entry
100221134 CDS
T01082
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100221134 (FXR1)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100221134 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
100221134 (FXR1)
mRNA cycle factors
Stress granule specific factors
100221134 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
100221134
NCBI-ProteinID:
XP_030136555
Ensembl:
ENSTGUG00000010560
UniProt:
H0ZJZ2
LinkDB
All DBs
Position
9:complement(18404014..18437887)
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AA seq
677 aa
AA seq
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MEELTVEVRGSNGAFYKGFIKDVHEDSLTVAFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKT
VKKNTFFKCTVDVPEDLRDACANENAHKDFKKAVGACRIFYHAETAQLIILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTTIELEEDTGTFRIYGETADAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRLERLQIDEQLRQIGMGFRPSSTRVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDNRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSSNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNPPKETVAKTKKETAKDAIDENSPSEKAVNGPATTSGDEPSKLQHSPDEKKVT
VQEDGNNQEEAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgttcatgaggactccctcacagttgcatttgaaaacaattggcaaccagagcgc
caggtgcccttcaatgaagtcagattaccaccaccccctgatatcaagaaagaaattggt
gaaggagatgaggtggaggtgtattctagggcaaatgaccaagaaccttgtggctggtgg
ctggcaaaagttcgaatgatgaaaggagagttttatgtcattgaatacgctgcttgtgat
gccacttacaatgaaattgtcacttacgagcgactgcgacctgtgaatcagaacaaaact
gtcaaaaagaacaccttcttcaagtgcacagtggacgttcctgaagacctgagagatgcg
tgtgctaatgaaaatgcacataaagatttcaagaaagctgtgggagcatgtagaattttt
tatcatgctgaaactgctcaactaataatactgtctgccagtgaagcaacagtgaagaga
gtgaacatcctcagtgacatgcacctgcgcagcattcgcaccaagctcatgctgatgtcg
agaaacgaggaagctacaaaacacttggagtgcacaaagcagcttgctgcagcatttcat
gaggagtttgtagtcagagaagatttaatgggacttgctataggaacgcatggcagtaac
atacaacaagccagaaaggttccaggagttacaaccattgaacttgaggaggataccggt
actttcagaatctatggagagactgctgatgcagtaaaaaaggccagaagttacttggaa
tttgtggaagattttattcaagttcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagattgtagacaaatccggagtcgtcagggtgagaattgaagga
gacaatgaaaataagctgccccgtgaagatggaatggtaccatttgtatttgttggtact
aaagaaagcattgggaatgtccaagttctgttggaatatcacatcgcatatctaaaggag
gtagaacaactaagactggaaaggctccaaattgatgaacagctgcggcagattgggatg
ggcttcaggccctcctctactcgagttcctgagaaggagaagggttacaccactgatgag
agcaccctctcctcggtgcaaggctccaggtcctacagcgggcggggcaggggccgcagg
ggccccaattacacctctggttacggtacaaactctgagctctctaatccctctgaaaca
gaatctgagagaaaagatgaacttagtgactggtccttggcaggagaagatgacagggag
agcaggcaccaacgtgacaacagacggcgtcctgggggacgaggacgtagcgtgtctgga
ggtcgtgggcgtgggggacctcgtggtggaaagtcgtccattagctctgtgcttaaagac
ccggacagcaacccgtacagcttgctggataacacagagtcagaccagaccgtggacacg
gacgccagcgagtcccaccacagcagcaaccgccgcaggaggtcacgccggcgaaggact
gatgaagatgctgttcttatggatgggatgacagagtctgatacagcttctgttaatgag
aatggtttagatgatagtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtaacagtagctgattatatatcacgagct
gaatctcaaagtagacagagaaaccctccaaaggagacagtagccaaaaccaagaaagaa
acggcaaaagatgcgattgacgaaaacagcccttctgaaaaggcagtgaatggtcctgcc
accacctctggggatgagccttctaaactacagcacagccctgatgaaaagaaagtcact
gttcaggaggatggaaataatcaggaagaagcagtgctgaatggtgtttcataa
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