Taeniopygia guttata (zebra finch): 100221159
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Entry
100221159 CDS
T01082
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100221159 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100221159 (PRPF3)
Spliceosome [BR:
tgu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100221159 (PRPF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
100221159
NCBI-ProteinID:
XP_030147115
UniProt:
H0Z2C5
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Position
25:1911556..1921681
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AA seq
684 aa
AA seq
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MSLSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVE
DEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDASGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTTSKKDEYFGITNLVE
HPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRIS
NLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKVKKLKEDVSQ
GVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML
HRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMARE
HFKKHSAEHYWDLALSESVLESTD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtccaagcgcgagctggacgagctgaagccatggatcgagaagacggtgaag
cgcgtgctcggcttctcggagcccaccgtggtcaccgccgcgctcaactgcgtgggcaag
ggcatggacaagaagaaagcggccgaccacctcaaacccttcctggatgattccaccttg
cgatttgtagacaaactctttgaggcagtggaggaaggacggagctcccggcactccaaa
tccaacagcgaccggaaccgcaagcgggagctaaaggatgtgtttggcgatgactctgag
gtgtccaaggaatcctctggtgtcaagaaacggcgcatcccacggttcgaggaggttgag
gacgagcctgaagtcattccaggcccgccatcggagagcccagggatgctgactaaactc
cagatcaaacaaatgatggaggcagccacccggcagattgaggagaggaaaaagcagctg
agtttcatcagtcctccgacaccacagcccaaaatttcttcttcatcccaatcggagcgg
ctccccatcggcaacacgatccagccctcgcaggcagccacgttcatgaacgacgccatc
gagaaggccaggaaagctgcagagctgcaggcgcggatccaggcccagctggccctcaaa
ccggggctcattggcaacgccaacatggtggggctggccaacctgcacgccatgggcatc
gcgccgccgaaagtggagctgaaggatcagaccaagcccacgcctctgatcctggatgag
cagggccggacggtggatgccagcgggaaggagatcgagctgacccaccgcatgcccacc
ctaaaggccaacataagagcggtgaagagagagcagttcaagcagcagcttaaggaaaag
ccctcggaagacatggagtcaaacacgtactttgacccccgggtctccataaccccggcc
cagcggcagaaacgcacctttaagttccatgaaaaaggcaaatttgagaaaattgcccag
aggttgagaacaaaggctcagctagaaaagctgcaggcagagatctcccaggctgccagg
aaaactgggattcacacttccaccaagttggctctgatcacccctaagaaggagctgaag
gagggggagatcccagagattgagtggtgggactcctacattatccccaatggcctggat
ttaaaaggcggcacgacctcaaagaaagacgagtactttgggatcacgaacctggtggag
cacccagcccagctcaatcccccggtggacagtgacacgccggtgaccctgggtgtgtat
ttaacaaagaaagagcagaagaaattacggcgccagacacggcgagaagcccagaaggag
ctgcaggagaaggtcaggctgggcctgatgccaccaccagagcccaaagtgaggatttcc
aacctgatgcgggtgctgggcacggaagctgtgcaggacccaacgaaggtggaagctcac
gtccgagcgcagatggccaagagacagaaggctcacgaggaagcaaacgcagcaaggaag
ctcacggcggagcagcggaaagccaagaaggtgaaaaagctcaaggaagatgtttcccag
ggagttcacatagctgtgtacagggtccgaaacttgagcaatccagcaaaaaaattcaaa
atcgaggcgaatgctgggcagctgtacctcacgggcgtggtggtcctgcacaaagatgtc
aacgtggtggtggtagaaggaggcccgaaagcacagaagaaattcaaacgtcttatgctg
catcgaataaagtgggacgagcagacgtcaaatacgaagggagaggatgatgatgaatct
gatgaggaatccgttaagaaaacaaacaaatgctctctggtttgggagggcacggcgaag
gatcgcagctttggcgagatgaagttcaagcagtgccccacggagaacatggcgcgggag
cacttcaagaagcacagcgccgagcactactgggacctggcgctcagcgagtccgtgctc
gagtccacggactga
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