Taeniopygia guttata (zebra finch): 100221356
Help
Entry
100221356 CDS
T01082
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgu01009
]
100221356 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100221356 (VPS54)
Protein phosphatases and associated proteins [BR:
tgu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100221356 (VPS54)
Membrane trafficking [BR:
tgu04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
100221356 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
100221356
NCBI-ProteinID:
XP_030125140
Ensembl:
ENSTGUG00000002268
UniProt:
H0YVN3
LinkDB
All DBs
Position
3:110014804..110059554
Genome browser
AA seq
970 aa
AA seq
DB search
MASSHSSSPVPQSNSSDAFFKKEVDATKHFRPVQSLPDVCPKEPTGNPNDLHDSPSLVVD
QQRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGMDFVDTEVTPSFYLPQITKEDFALY
QQEITPREKVHERCKNICTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKVYNKLKLMATVHQTQ
PTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMINTAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRVKATLNTIRSVVFLVL
DKNQKTRESRDLEDTLQKNSAKESVVDSEVAYLTHEGMFISDAFGEADSQRNVSPSSEPC
SSDSVSEPEGTTDSSSSKEHTSSSATPGGVEMMISEDMKLTDLELVRLANNIQELLYNAS
DICHDRSVKFLMARAKDGFLEKLNSSEFVTLSRLMEGFILDTEQICGRKSMSLRGALQSQ
ANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPTATEERK
PAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFNSRSCQL
VLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLRHFDHIT
KDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIYDLLPE
EQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALKGLNNLDL
NMAEIWEQKR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagtcgaacagcagcgatgctttcttt
aaaaaagaagtggatgccacgaaacacttccgacctgtgcagtccctgccagacgtgtgt
cccaaggagcccacaggcaatcccaatgacttacatgacagcccatctctagttgtggat
caacaaagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggaatggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaagattttgcattatac
caacaggaaatcactccgagagagaaggttcatgaaaggtgcaagaatatttgtactcct
aaagatacctttgacaggacactattacacactcacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacgtttaat
gccgttttaccatggtctcattttagtactgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttgcttcaagaaaagctgagccattatctggacatcgtggaagtcaatatt
gctcatcagatttctctccgttcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaggctgtaaaattgcttagagagaaaatctct
aaaattgataaagtaatgtgtgaaggatcgcttcgagttttaagactgtcgctcaccaga
aataactgtataaaagtatacaataaactgaagttaatggctactgtacaccaaacacag
cccacagtacagctgctgctctccacttcggagtatgttggagctttggacttaatagca
acaacacaagaggtgttacagcaagagctgcaaggtattcacagtttccggcatcttggc
tcacagctttgtgaactggagaagctgatagataaaatgatgattgcagagttttcaact
tatgctcgcaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttgtatctctagtatttggacttctaaaacaaaggaagctaaatttttatgaaata
tatggagatgaaatgattaatactgcaaagaatataattaaacagtgtgtggttaatacg
gtatcacagatagaagaaatagacacagaagtggttgttaagcttgcagaccagatgagg
atgatgaattttcctcagtggtttgatttactgaagaatatattttcaaaattcactatc
ttcctcaagagagtaaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaccagagaaagcagagacctggaggacacgttacagaagaactct
gctaaggagagcgtggtggacagcgaggtggcctacctgacccacgaggggatgttcatc
agcgacgccttcggcgaggcggactcccagaggaacgtctcccccagcagcgagccctgc
agcagcgactccgtctccgagcccgagggcaccaccgactcctcctccagcaaggagcac
acctcctcttctgccactccaggaggagtggagatgatgatcagcgaggacatgaagctg
actgacctggagctggtcaggctggcaaacaacatccaagagttactttacaacgcctct
gacatctgccacgatcgttcggtcaagttcctcatggcaagggcaaaggatggcttccta
gagaagctgaattccagcgagttcgttactctttctcgcttgatggaaggctttatcttg
gatactgagcagatctgtggcaggaaaagcatgtccttgagaggagctcttcagagtcaa
gccaatagatttgtgaataggtttcatgaggagaggaagacaaaactaagcttgcttttg
gacaacgagcgctggaagcaagctgaggttcctgccgagttccaggacctcgttgattcg
gtgtcagatggcagaatttctctccctgaaaaaaaaccaacagctactgaagaaagaaag
ccagctgaattccttattgttgaaggacaaaaatatgcaacagttgggacagtattgctg
ctaataagaataatcctggagtactgccagtgtgtggataacattccttccatcaccact
gacatgctgacccgcctgtcggatttactcaagtatttcaactctagaagttgccaatta
gtgcttggagctggtgcattacaagttgttggcttgaaaacaatcactacaaaaaaccta
gccctttcttcgcgttgcctccagctcatcgtacactacattcccattatcagggctcat
tttgaagctcggctgcagccgaagcagttcagcatgctcaggcattttgaccacatcaca
aaggattatcatgaccacatagctgaaatttcagcaaagctcgttgccataatggatagc
ttatttgacaaactattatccaagtatgaagtgaaagcccctgttccttcagcatgcttc
aggaatatctgcaagcaaatggcaaagatgcatgaagctatatatgatctccttcctgag
gagcaaactcagatgttgtttttacgaattaatgcaagctacaaactccacctgaagagg
cagctggcccacctcaatgtggtcaatgatggaggacctctgaacgggctggttacctca
gatgtggctttttacactggaaaccttcaagctctgaaaggccttaacaacttagatcta
aacatggctgaaatctgggagcagaagaggtga
DBGET
integrated database retrieval system
