Taeniopygia guttata (zebra finch): 100221383
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Entry
100221383 CDS
T01082
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X1
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100221383 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100221383 (DDX41)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100221383 (DDX41)
Spliceosome [BR:
tgu03041
]
Complex C
Other components
Complex C specific factors
100221383 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
SecA_DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100221383
NCBI-ProteinID:
XP_002193843
Ensembl:
ENSTGUG00000000413
LinkDB
All DBs
Position
13:15190909..15196916
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AA seq
617 aa
AA seq
DB search
MEAVAERKRQREEPADTSDLSGEDDDDYVPYVPVKQRKQQMLQKLLQMRRKVVSEEEQRD
SGSEQRGDEDDIPLGPQSNISLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRA
LMSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFKE
MKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLE
QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDGLPPLRCALCIGGMSVKE
QMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYF
KGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLL
ECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDV
LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL
MDLKALLLEAKQKVPPVLQVLHCGDETMLDINGERGCAFCGGLGHRITDCPKLEAMQTKQ
VSNIGRKDYLAHSSMDF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtggcggagcggaagaggcagcgcgaggagccggcggacacgtccgatctg
tccggagaggatgatgacgactacgtgccctacgtgcccgtcaagcagcgcaagcagcag
atgctgcagaagctgctgcagatgcggaggaaggtggtgtccgaggaggagcagcgggac
agcggcagcgagcagcgcggggacgaagatgacatcccgctggggccccagtccaacatc
agcctgctggaccagcaccagcacctcaaagagaaggcagaagctcggaaggaatcagcc
aaggagaagcagctgaaggaggaagagaagatcctggagagcgtggcagagggccgagct
ctgatgtcggtgaaggagatggccaagggcatcacctatgatgacccaatcaaaaccagc
tggagagcccctcgctacatcctgggcatgtcggaggcacggcacgaccgtgtgcgcaag
aagtaccacatcctggtggagggagagggcatcccaccccccatcaaaagcttcaaggaa
atgaagttcccagcagctatcctgagaggcttgaagaagaaaggaatccagcagccaaca
cccatacagatccagggcatccccacaatactctcaggaagggatatgattggcattgca
ttcactggttctgggaagaccttggtgttcaccctcccggtgatcatgttctgcctggag
caggagaagaggctgccattctctaagcgagagggaccctatggactcatcatctgtccc
tcgcgggagctggcccggcagacccacggcatcctggagtactactgtcgtctgctgcag
gaggatgggctgcccccgctgcgctgcgccctctgcatcgggggcatgtctgtcaaggag
cagatggagaccatcaaacatggggtacacatgatggtggcaacccccgggcgcctgatg
gacctgctgcagaagaagatggtgagcctggacatctgccggtacctggccttggatgag
gctgacaggatgatcgacatgggctttgagggcgacatccgtaccatcttctcttacttc
aagggccagcggcaaaccctcctcttcagtgccacaatgcccaagaagatccagaacttt
gccaagagtgccctggtgaagcccatcaccattaacgttgggcgagcgggtgctgccagc
ctggatgttgtgcaggaagtggaatatgtgaaagaggaggccaagatggtgtacctgctg
gagtgcctgcagaagacccctccacctgtgctgatcttcgcagagaagaaggcagatgtt
gatgcaatccacgagtacctgctgctcaagggtgtggaagctgtggccatccatggaggg
aaagatcaggaagaacggacaaaagccattgaggccttccgggatgggaagaaggatgtc
ctggttgccactgacgtcgcttccaagggcctggacttcccagccatccagcacgtcatc
aactacgacatgccagaggagattgagaactatgttcaccgcatcgggcgtacaggccgt
tcaggcaacactggcattgccaccaccttcatcaacaaggcctgtgacgagtcagtgctg
atggacctgaaggctctgctcctggaggcgaagcagaaggtgccgccggtgctccaggtg
ctgcactgtggggacgagaccatgctggacatcaatggtgagcggggctgtgccttctgt
ggtggcctgggccatcgcatcactgactgccccaagctggaggccatgcagaccaagcaa
gtcagcaacattggccgcaaggactacctggcgcacagctctatggacttttag
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