Taeniopygia guttata (zebra finch): 100221457
Help
Entry
100221457 CDS
T01082
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100221457 (DDX17)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100221457 (DDX17)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100221457 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100221457
NCBI-ProteinID:
XP_002195734
Ensembl:
ENSTGUG00000010391
UniProt:
H0ZJG0
LinkDB
All DBs
Position
1A:48848372..48867166
Genome browser
AA seq
655 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERGESFANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYNASGYGASTTAATAGRTSQSTT
QQQFAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcgt
ggaggtcctcttcccccaaagaaatttggtaatccaggggaacgtttacgtaagaaaaaa
tgggatttaaatgaactgcccaagtttgagaagaatttttatgtggaacatccggaagtg
gccaggcttactccatatgaagttgaagagctgagaaggaagaaggagataacaattcgc
ggaatggagggctgccccaagccagtgtttgccttccaccagtgtagctttccacagtat
gtgatggatgccttgatggaccagaacttcacagaacccactccgattcagtgccaaggc
tttccactagccctcagcggtcgggacatggtgggcattgcacagaccggctctgggaag
acactagcatacttgttgcctgcaattgttcacatcaaccaccagccgtatttggagaga
ggagatggcccaatttgtctggttctggcacctactagagagttggcccagcaagtgcag
caagtggctgatgattatggcaaatgttcaagactgaagagtacctgcatatatggagga
gcacccaaaggtccccagatcagagatttagaaagaggtgtggagatctgcattgctaca
ccaggtcgcttgattgacttccttgaggctggaaagaccaaccttcgtcggtgtacgtac
ctggtgctggatgaagctgacagaatgttggacatgggatttgaaccacaaattcgtaaa
attgttgaccagataaggcctgaccgccagactctgatgtggagtgccacctggcctaaa
gaagtgcgccagcttgctgaggacttcctgcaggactatgttcagatcaacgtggggaac
ttggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgag
aaagaccataaactgatacagctgatggaagaaatcatggcagagaaggaaaacaagact
atcatctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcagccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagacgtggaagatgttaaatttgtgataaactacgactatccgaacagctccgaagat
tatgtgcatcgtattggccgtaccgcacgtagtaccaacaaaggtactgcctacaccttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtcttggaagaagccaat
caagccatcaatccaaagctgatgcagcttgttgaccacagaggaggaggaggtggtggt
ggaggaggtcgttctcgttaccgaacgagcagttcggtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtggtgaaagttttgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacaatgct
agtggctatggtgccagcaccacagctgccacagctgggagaacctcacagagcactacc
caacagcagtttgcagggatggtggggcgctcgggccagcagccacagccgctcatgtca
caacagtttccgcagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtacccgccccctcccccgcccccacccccctcccgcaaatga
DBGET
integrated database retrieval system
