Taeniopygia guttata (zebra finch): 100221542
Help
Entry
100221542 CDS
T01082
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X2
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04210
Apoptosis
tgu04218
Cellular senescence
tgu04620
Toll-like receptor signaling pathway
tgu04621
NOD-like receptor signaling pathway
tgu04622
RIG-I-like receptor signaling pathway
tgu04623
Cytosolic DNA-sensing pathway
tgu04625
C-type lectin receptor signaling pathway
tgu04920
Adipocytokine signaling pathway
tgu05132
Salmonella infection
tgu05164
Influenza A
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100221542 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100221542 (NFKB1)
04218 Cellular senescence
100221542 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100221542 (NFKB1)
04621 NOD-like receptor signaling pathway
100221542 (NFKB1)
04622 RIG-I-like receptor signaling pathway
100221542 (NFKB1)
04623 Cytosolic DNA-sensing pathway
100221542 (NFKB1)
04625 C-type lectin receptor signaling pathway
100221542 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100221542 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100221542 (NFKB1)
05168 Herpes simplex virus 1 infection
100221542 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
100221542 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100221542 (NFKB1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
100221542 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Death
Ank_5
Motif
Other DBs
NCBI-GeneID:
100221542
NCBI-ProteinID:
XP_002193384
Ensembl:
ENSTGUG00000003595
LinkDB
All DBs
Position
4:complement(48636230..48695106)
Genome browser
AA seq
1005 aa
AA seq
DB search
MSRIPPWAKERGQGRDDSCGGGLKMAAEDSYIMGVSDPQMFTVDQFMGMNALFNSTNYIT
ADLPLRTADGPYLQIIEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVG
PAKVIVQLVTNGKYVHLHAHSLVGKFCEDGVCTVIAGPKDMVVGFANLGILHVTKKKVLE
TLETRMIDACKKGYNPGLLVHPELSYLQAEGCEDRQLTEREREIIRQAAIQQTKDMDLSV
VRLMFTAFLPDSNGSFTRRLDPVISDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLL
CDKVQKDDIQIRFYEEDENGGMWEGFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFV
QLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGTGG
SAGSGFSFPSYGYSAFGGMHFPGTTKSNAGMKHGLSNCTAEQDRKSCDKQNDQWGMKCDV
KAEAVEKTECRTSAVNEKKEDSVFSCKTEASEADCRWRDALFLEKAMQLARRHCNALFDY
AVTGDVKMLLAAQRHLTAVQDDNGDNVLHLAIIHLHRDLVKNLLEVMPDLNYNDIINMRN
DLYQTPLHLAVITKQAKVVEDLLKAGADVSLLDRHGNSVLHLAATEGDDKILSLLLRHEN
VSPMVNLPNAEGLSAIHMVVMANSMSCLKQLLAAGVNVNAQEQKSGRTALHLAVEQENIP
LAGCLLLEGDADVDSTTYDGTTPLHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDYV
KEDEDDDEGIVPGTTPLDMAANSEVYDILNGKPYESAEVLEDLLTQGHLRELSENSKMQL
YKLLELPDPTKNWSTLAQKLGLGILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQM
DHTEAIEIIQEALSISRRPPALEDSTAKALPSSSPLTFANGETGELFNSRFQDLESTCDS
GVETSFRKLSFTSSDSLTSKSSLTLGKMALGYGHERSGQSNYIAD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaattccgccgtgggccaaggaacgtgggcaaggacgggacgattcttgcggc
ggcggacttaaaatggcagcagaagattcctatattatgggagtatctgatccccaaatg
tttacggtggatcagttcatgggaatgaatgctttatttaacagtacgaattacatcact
gcagacttaccactacgaacagcagatggaccatatcttcaaatcatagaacagccaaaa
cagaggggatttcgtttccgatatgtatgtgaagggccttcgcacggtggacttcctggt
gcctctagtgaaaagaacaaaaaatcataccctcaagtcaaaatctgcaattatgttgga
cctgcaaaagtaattgtccagttagtgactaatgggaaatacgtccacttgcatgctcac
agcttggtgggtaaattctgcgaagacggagtgtgcacggtaatcgcagggcccaaggac
atggttgtagggtttgcaaatcttggaatacttcatgtcacaaagaagaaggtgttagaa
actctggaaacacgcatgatagatgcttgcaagaagggatacaacccaggactcctggtg
catccagaactcagctatctgcaggcagaaggatgtgaagacaggcagctaactgaacgg
gaaagagaaatcatccgccaggcagccatacagcagaccaaggacatggatctcagcgtg
gtgcggctcatgttcacagccttccttcccgacagcaacggcagcttcacacggagactc
gatcctgtaatatcagatgcaatatatgacagcaaagctcccaatgcctccaacctaaaa
attgtaagaatggacagaacagcagggtgtgtgacaggaggggaagagatttacctgctc
tgtgacaaagttcagaaagatgatattcaaatacgtttctatgaagaggatgagaatggt
ggtatgtgggaaggctttggagatttttctcctacggatgtacatagacagtttgctatt
gtgttcaaaacacccaaataccgagatgtcaatatcacaaagccagcatctgtgtttgta
caactgcgtaggaaatctgatctagaaacaagcgaaccaaagccttttctctactatcca
gaaatcaaagataaagaagaagtgcaaaggaaacgacagaagctcatgccgaacttctcc
gatggctatggtggaggcagtggcaccggaggtggtggcatgtatggagggacaggtggc
agtgctggctctgggttcagttttccttcatatggatactctgcttttggagggatgcat
ttccctggcacaacaaagtccaatgctggcatgaaacatggtctatcaaattgcacagct
gaacaagacagaaagagctgtgataaacaaaatgaccaatggggcatgaaatgtgacgtg
aaggcggaagccgtggagaagactgagtgcagaacgtctgctgttaatgagaaaaaggag
gattctgttttttcctgtaaaacggaagcaagcgaagcagattgcaggtggcgggatgct
ctgttcctggagaaggccatgcagcttgccaggcgccactgcaacgctctcttcgattat
gctgtaactggggacgtgaagatgctcttggcagctcagcgccatctcaccgctgtccag
gatgataatggggacaatgtccttcatttagcaattatccaccttcatagagatctggtg
aaaaacctcctggaagtgatgcccgatttgaattacaatgacatcattaacatgagaaat
gacctctatcagacccccctgcacttggcagtaatcacaaagcaggcaaaggtggtggaa
gacttgctgaaggctggagcagatgtcagccttctggatcgccacggcaattctgtctta
catttagctgctactgaaggagatgacaagattttgagtctactcctcaggcatgagaac
gtatctcccatggtcaacctccccaatgctgaaggtctcagtgcaattcacatggtggtg
atggcaaatagcatgtcctgcctcaaacagctgcttgctgctggagttaatgtcaatgct
caggaacaaaaatctggacgaactgcactgcacttggctgttgaacaagagaacatcccc
ttggcaggctgccttttgcttgagggtgatgcagatgtggacagcactacatacgatggg
acaactccacttcacatagcagctggaaggggctcaacaaaactggcagcagttctcaaa
gcagcaggtgcaaatcctcacattgagaactttgagccattgtttgacttagattatgtg
aaagaggatgaagatgatgatgaagggattgtgcctggaacaacaccactggatatggca
gccaactctgaggtgtatgacatattaaatggcaaaccctacgagtcagcagaggttttg
gaggacttactcacacaaggacatttgagagagctgagtgagaattccaagatgcagctt
tacaaactattggaattgcctgatccaaccaaaaactggtccaccctagcacaaaaactg
ggtcttggcatacttaacaatgccttcaggttgagcccttccccatcgaagactctgctg
gataactatgaggtgtctggcggtacagttcaagagctgatcactgctttgagacagatg
gatcacacagaagctatagaaataattcaggaagcactgtccatctcacgcagaccacct
gccctggaagacagcacagcaaaagctcttccgtcatcatcaccactcacctttgcaaat
ggagagacaggtgagctctttaatagcagattccaagacctcgaaagtacctgtgacagt
ggtgtggagacctccttccgcaagctgagcttcacttcctcagactctctgaccagcaag
tcctcactaacacttggcaaaatggccctgggctatggacatgaaaggtcagggcaaagc
aattacatagctgactag
DBGET
integrated database retrieval system
