Taeniopygia guttata (zebra finch): 100221573
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Entry
100221573 CDS
T01082
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100221573 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100221573 (MYO5C)
04131 Membrane trafficking [BR:
tgu04131
]
100221573 (MYO5C)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100221573 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100221573 (MYO5C)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100221573 (MYO5C)
mRNA cycle factors
P-body specific factors
100221573 (MYO5C)
Membrane trafficking [BR:
tgu04131
]
Others
Actin-binding proteins
Myosins
100221573 (MYO5C)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100221573 (MYO5C)
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100221573 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100221573
NCBI-ProteinID:
XP_030136831
UniProt:
H0Z8M5
LinkDB
All DBs
Position
10:8472971..8505972
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELKHPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDSSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMMETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEVAAVGDERSSISMEDKHLRIFCE
LLDLKCDKMARWLCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSISPF
SSTINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACILIQKRVRGWLQRRRFLAVR
GAALTVQQYFRGQRTVRQAITARNLKQTWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTNLASAHMNDVDTIQKLESELEKLTAQKRTYEEKGRKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKNQLQQQIQQEIIIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDSIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTMKLKEMSNRLHYELERDKTQRRTT
EAQNEVDIKEKESLKDTIQGIEGLSNGLMQDEVQGELQSKIKQVTTRLAVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTIEKSEAHVPTVPKEYVGMMEYKKEDEERIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKGHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKYNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQFIIVMEN
NIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLNNREEVPQLMLDTKYLFQVTFPFSPSPHALELIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctgcatgtg
caattagaggatggaactgagctgaaacaccctgttgatccagctgctttgcctccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgccctcagttatctgcatgaa
ccagctgttctacacaatcttaaaattcgttttgtggagtctaaacttatctacacatat
agtgggataattctggttgcaataaacccctataagcagctgcccatatatggagatgcc
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaggcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtatactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacacgtggaggacaaagttctggcatccaatccaata
accgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtcgatttggaaaa
tacactgaaatcagttttgatagcagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtgtttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcagcctgaatatgaacatcttaaattgggaagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggggttgatgacaga
gcaaatatgatggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggacgtttttaaaatgctggcagcaatcctgcacttgggcaatgtggaagtagcagct
gttggagatgaaagatcatccatcagtatggaagataaacatctcaggatattctgtgag
ctcctggatttaaaatgtgacaaaatggcccggtggctgtgccacagaaagattgtcacc
acctcggagaccgtggtaaagccaatgacgagggcacaggctgtcaacgccagggatgct
ctggcaaagaagatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaagcaacacactttcattggtgttttggatatttatggatttgaa
acatttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaggaatgcttgttgcctcatggaaaagatgaaaac
tggcttcagaagctgtataataattttgtcaataaaaatgcgctctttgaaaagccaagg
atgtcaaacacgtctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacacgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacagtccagtgtccatttcacctttc
agttcaactataaacatcaaatctgccagacctgttctgaaatcacccaacaaacagctc
cggacaactgtgggcagtaagttccggaattctttgtctttacttatggtgacactcaat
gcaactactcctcattatgtgagatgcataaagccaaatgatgagaaattgccctttgag
tttgattccaagagagttgctcagcagctgcgagcatgtggtgttttggaaactattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attctcatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagaggctgatccaggatcataaccaatatcaattcgggagaaccaagatttttttc
cgagcagggcaggttgcttacctggagaagctgcgctcagacaagctgaggcaggcgtgc
atcctgatccagaagcgtgtccggggctggctgcagcggcggcggttcctggccgtgcgg
ggagcggcgctgacggtgcagcagtacttccgcgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaagcaaacatgggcagccataattattcagaaatactgtcggggt
tacctggtccgtagactttgccagctcatccatgtggctgctgtaacaatacaagcttac
acaagaggatttctagcaagaaaaaagtatcggaagatgcgtgaagagcagaaggctgtg
gtcctccagaaatacgcccgagcgtggctcgccaggcgccggttccagaacattcggcgc
tttgtgttgaatatccagctctcatacagagttcagcagctgcagaaaaagatagaagag
cagagtagagaaaatcatggtttgctggaacgattgaccaatctggcttcagctcatatg
aatgacgtggatacaattcagaaacttgaatcagaactggaaaaattaactgctcaaaag
aggacatatgaagagaaagggagaaaatataaagaggacagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaggagaccttagaaataaaactccaa
gaaaaaaccgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacaaaaagaagaaaaccagcgaatgatacttgagaaaaatttccaaaaccagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaa
aatcagttacagcaacaaattcagcaggaaattatcattcaggatggcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacctgagttgcaaaaggaaatcgaactt
cttcagacacagaaattggatgttgaaaagcaggcccactcacagaagagagaattgagg
gaaaagatgtcagaagttacaaagcagcttcttgaaagttatgattttgaagatgtaaga
agcagactctctacagaggatctggaacacttaaatgaggatggagagctgtggtttgct
tatgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatcttagtcaagatatt
aatcatctacaaaaattattccgagaggaaaatgacataaatgatagcattcggcttgaa
gttagcaggctaacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagaccatgaagttgaaa
gagatgtcgaatcggctgcattatgagctagaacgggataagacacaaagacgaactact
gaggcccagaatgaagtagacataaaagaaaaagagagtctgaaggacacaatccaagga
attgaggggctgagcaatggtttgatgcaagatgaagtccagggtgaactacaaagcaag
ataaagcaagtgacaactcgacttgctgtggaaaatatggatcttgaagaaaagctagac
atgaaagacagaataataaaaaaattagaagatcagatcaaaactctgaccaagactatt
gaaaaatctgaagcccacgtgcccactgtgcccaaagagtatgttggaatgatggagtac
aaaaaagaggacgaagaaaggatcattcagaatctgatcctcgatttaaagccacgtgga
gttgtagttaatatgatacctggccttccagctcacatcctgttcatgtgtgtgaggtat
gcagattacctgaacgatgctgacatgctgaagtctttcatgaatgtcaccattgatggc
atcaaacaggttgttaaggggcattcagaagactttgagatgttgtccttttggctttcc
aacacatattattttcttaactgcttgaagcagtacagcggggaagaggaattcatgaag
tataacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacaga
caaattctcagtgatttggccattcaaatatatcaccaattcattattgtaatggagaac
aacattcagcatatgattgtaccaggcatgctggaatatgaaagtcttcaaggaatttct
ggcttgaaacctacagggttccgtaaacgttcttctagtatagatgacacagatacctac
actatgacctctatcttgcagcagctcagctatttttatagcactatgtgtcagaatggc
ttggactctgagctcctaaagcaggcagtgaagcagcttttcttcctgattggagctgtc
accctcaatagcctcttcctccgcaaggacatgtgctcctgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaagcagcaat
gccaaagaaactttggagcccctgtctcaagcagcctggctccttcaggttaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagatcctgaactcatacactccaatagatgactttgagaaaagagtgactccatcg
tttgttcggaaggtccaggccatgctaaacaaccgtgaggaggttccacagctgatgctt
gataccaagtacctctttcaagtgacgtttcctttcagcccctctccgcatgctttggag
ctgatacaagtccccagcagcttcaaacttggctttctcacgagggtttaa
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integrated database retrieval system
