Taeniopygia guttata (zebra finch): 100221691
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Entry
100221691 CDS
T01082
Symbol
SEMA5B
Name
(RefSeq) semaphorin-5B isoform X1
KO
K06841
semaphorin 5
Organism
tgu
Taeniopygia guttata (zebra finch)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_spondin
PSI
TSP1_CCN
TSP1_ADAMTS
7TM_GPCR_Srz
Motif
Other DBs
NCBI-GeneID:
100221691
NCBI-ProteinID:
XP_030133005
Ensembl:
ENSTGUG00000004366
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Position
7:5212371..5483434
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AA seq
1092 aa
AA seq
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MIVSRLKAISLSLPSLFLLAFHLSASQNVPEYTEAEHQQCVRKEHPTIAFEDLKPWVSNF
TYPGVHDFSQLALDANRNQLIVGARNYLFRLSLHNVSLIQATAWGSDEDTRRSCQSKGKT
EEECQNYVRVLIVYGKKVFTCGTNAFSPVCSSRQVGNLSKIIDRINGVARCPYDPRHNST
AVITSRGELYAATVIDFSGRDPAIYRSLGNVPPLRTAQYNSKWLNEPNFIAAYDIGLFTY
FFFRENAVEHDCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKARLNCSRAGEIPFYYNE
LQSTFYLPEQDLIYGVFTTNVNSIAASAVCAFNLSAITQAFNGPFRYQENPRSAWLPTLN
PIPNFQCGTLNDKSPNENLTERVLQDAQRLFLMNDVVQPVTVDPYVTQDSIRFSKLVVDI
VQGKDTLYHVMYIGTEYGTILKALSTTNKSLRSCYLEEMQILPDGQQEAIKSLQILQSNR
SLFVGLNNGVLKIPLERCSMYRTEGECLGARDPYCGWDSKQKRCTTIEDSSNMSLWTQNI
TECPVKNLTTNGRLGPWSPWQLCEHSDGDSTGSCMCRSRSCDSPRPRCGGRSCEGARIEV
ANCSRNGAWTPWSSWAPCSTSCGIGFQVRQRSCSNPAPRYGGRVCVGQSREERFCNENSP
CPLPIFWSSWGPWNKCSVNCGGGIHSRQRSCENGNTCPGCAVEYKTCNPESCPEVRRNTP
WTPWMPVNITQNGARQEQRFRYTCRAQLSDPHELQFGRKKTESRFCPNDGSAVCDTDSLV
DDLLKTGKTSARIINGGWSFWGAWSSCSRDCELGFRIRKRTCTNPEPKNGGLPCVGSAME
YQDCNPHPCPVKGSWSCWTPWSHCSATCGGGHYQRTRTCTNPAPSSGEDICIGLHTEEAL
CNTHPCQGGWSEWSEWSLCNEEGIQYRSRYCEVHSPDSSQCVGNSTQYQECLYNEIPVIL
PASSIDESTNCGGFSLIHLIATGVSCFFGSSLLTFVIYVYCQRCQRQSQESTVIHPTTPN
HLHYKGNTTPKNEKYTPMEFKTLNKNNLIPDDRTNFYPLQQTNVYTTTYYPSTLNKYDYR
PETSPGRTFTNS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgattgtttcaagattaaaggccatttccctgtcattgccaagcctttttcttcttgct
tttcatctctcagcatcacagaatgtacctgaatacactgaagctgaacatcagcaatgt
gttaggaaagagcaccccacaattgcttttgaagatctgaagccctgggtgtcgaatttc
acctatccaggtgtgcatgacttttctcagcttgcactggatgccaacaggaaccaactc
attgtgggagcaaggaactacctcttcagacttagtctacacaacgtttctcttattcag
gcaacagcatggggttcagatgaagacactaggaggtcctgtcaaagtaaagggaaaaca
gaggaggagtgccagaactatgtccgagtgctgattgtttatggcaagaaggtttttacc
tgtggtaccaatgccttttcaccagtgtgttccagtcgacaggtaggaaatctcagcaaa
atcattgacagaattaatggagtggctcggtgcccatatgaccctcggcataactcgaca
gctgtgattacatcacgaggagagctctatgctgcaactgtgattgatttttctggacgg
gatcctgctatttaccgcagccttggaaatgttcccccacttaggacagcacaatacaac
tccaaatggctcaatgagcctaactttattgctgcctatgacatcggcttgttcacctac
ttcttcttccgtgagaatgcagtggaacatgactgtgggaaaactgtgtattctcgtgtg
gcaagggtttgcaagaatgatatcggagggaggtttctgctggaggacacttggacaact
ttcatgaaggccagactgaactgctcccgtgctggagaaatccctttctattacaatgaa
ctgcaaagcaccttctaccttcccgagcaagatctgatctacggcgtcttcactactaat
gtaaacagcatagctgcctcagcagtgtgtgccttcaatctgagtgccattactcaggca
tttaatggtcccttccgctatcaagaaaacccaagatcagcctggctgccaacattaaac
cccatcccaaatttccagtgtgggacactgaacgacaagagccccaacgagaacctgacg
gagagagtcctgcaggacgcgcagcgcctgttcctgatgaacgacgtggtgcagccggtg
actgtggacccctacgtgacgcaggacagcattcgattttccaaactggtggttgatatt
gttcaagggaaggatactctctaccatgtcatgtatattggaacagagtatggcaccatc
ttgaaggccctttctaccaccaacaagagtctgaggagttgttatttagaggaaatgcag
atcctccctgatggacaacaggaagcaatcaagagtctccaaatcctacagagcaacagg
tcactctttgtgggtctaaataatggagtgctaaaaattcctttggagagatgctccatg
tacagaacagaaggggaatgcctgggagccagagacccttactgtggctgggatagcaag
cagaagcgatgcaccaccattgaggacagctccaacatgagcctctggacccaaaacatt
actgagtgcccagtgaaaaacctgacaacaaatggaagattggggccttggtccccatgg
caactgtgtgagcattcagacggggacagcacaggctcctgtatgtgtaggtcacgttca
tgtgacagccctcgtcctcgctgtggaggtcgcagctgtgaaggggccaggattgaggtc
gcaaattgttcaagaaatggtgcttggacaccgtggtcttcctgggccccatgcagcacc
tcctgtgggatcggcttccaggtccggcagcgctcctgcagcaatcccgccccacgctat
gggggcagggtctgtgttggacagagcagggaggaaagattctgtaatgagaacagtcca
tgtccattaccgattttttggtcttcatggggaccttggaataaatgtagcgtgaattgt
ggtggagggattcactcaaggcagaggtcctgtgaaaatggaaacacatgtccaggctgt
gctgtggaatacaagacctgcaacccagagagctgcccagaggtgcgcaggaacacgccc
tggaccccgtggatgcccgtcaacatcacccagaacggtgcccgccaggagcagcgcttc
cgctacacgtgccgggcccagctgtcggacccccacgagctgcagttcgggaggaagaaa
acggagagtcgcttctgccccaacgatggctccgcagtgtgtgacactgactctcttgtt
gatgatctcctcaagactggtaagacctctgcacggattatcaatgggggctggtccttt
tggggggcctggtcttcctgctccagggactgtgagctgggctttaggatcaggaagaga
acatgcacaaaccctgaacctaaaaatggtggcttgccctgtgtggggtcagcgatggaa
taccaagactgcaatcctcacccctgcccagtgaaaggctcgtggtcttgctggactccc
tggtctcactgctcagccacctgtgggggtgggcactaccagcgcacgcggacctgcacc
aacccagctccatccagcggagaggacatctgcatcgggctgcacaccgaggaggccctc
tgcaacacgcacccctgccaaggtggctggtcagagtggtcagagtggagcctgtgcaat
gaagagggcatccagtaccgcagccgctactgcgaggtgcacagcccggactcctcccag
tgcgtcggaaacagcactcagtaccaggagtgcctgtacaatgaaattcctgtgatcctg
ccagcctccagcattgatgagagcacgaactgtggaggttttagtctcatccatttgatt
gccactggagtctcctgttttttcggctccagcctgttaacgtttgtgatttacgtgtat
tgccagcgctgccagaggcagtcccaagagtccactgttatccacccaaccactcccaac
catctccattacaagggcaacacaacccccaagaatgagaagtacacccctatggagttc
aagacacttaacaagaacaacttgataccggacgacagaaccaacttctatccgctgcag
caaaccaatgtgtacacaacaacctattatcccagtacactgaataaatatgattacagg
cccgagacctcccctggaaggacatttaccaacagctga
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