Taeniopygia guttata (zebra finch): 100221782
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Entry
100221782 CDS
T01082
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100221782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100221782
Transporters [BR:
tgu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100221782
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100221782
NCBI-ProteinID:
XP_030141851
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Position
15:9497615..9505081
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AA seq
576 aa
AA seq
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MAEQPCLGPPASPAPPNPHSHPRDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNGGGA
FLIPYTLMAVFGGVPLFYMELALGQFHRTGAIPIWKRICPIFKGIGFAICIIGLYVSFYY
NTIIAWALYYFCSSFSGTLPWASCDNPWNTPDCTNYFGKSNVTWTNFSRSPAEEFYTRKV
LEIQKSGGLDDIGGIRWQLLLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLLILL
IRGATLPGAWRGVVFYLRPDWGKLLSTTVWVDAAAQIFFSLGPGFGVLLALASYNHFHNN
CYRDALVASAVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVARDKGPSLLFITYPEAIAN
MVGSTFFAIVFFLMMITLGLDSTFGGLEAVITAVMDEYPQVLAGRRELFVLGLITVCFLG
SLSTLTYGGAYVVKLLEEFGAGCSILAVVLLETIAVSWFYGIQRFSHDVKAMLGFTPGLF
WKLCWVAISPALLAFIVISSLLDQPPLTLFEHQYPEWSTSVGFLIGASSFICIPLYMVYK
LVWTPGSLKQRLAVCIRPEKLLRAPQAEGVGMTPVL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagccctgcctgggtccccctgccagccctgcacccccaaacccccacagc
caccccagggacaagtggagcaaaaagatggatttcctcctctccgtcatcggattcgcc
gtcgatctgggcaacgtctggcggttcccttacatctgctaccagaatggagggggagcc
ttcctcatcccctacacgctgatggcagttttcgggggggtgcctctgttctacatggag
ctggccctggggcagttccacaggacaggtgccatccccatctggaagcgcatctgcccc
atctttaaaggcatcggctttgccatctgcatcatcggcctctacgtctccttctactac
aacaccatcattgcctgggctctctactacttctgctcgtccttctcgggcaccctgccc
tgggcgagctgtgacaacccctggaacacccctgactgcaccaactactttgggaagagc
aacgtgacctggaccaacttctccaggtcccccgccgaggagttttacacgaggaaggtc
ctggagattcagaaatccgggggtctggatgacattggggggatccgctggcagctgctc
ctctgcctcttcctcatcttcaccatcgtctacttcagcctgtggaaaggggtgaaaacc
tctgggaaggtggtgtgggtgacagccacgctgccctacgtggtcctgctcatcctgctc
atccgaggggccaccctgcctggagcctggagaggggttgtgttctacctgcgcccggac
tggggcaagctcctgagcaccacggtttgggtggatgctgctgcacagattttcttctcc
ttgggccctggatttggagtcctccttgctctggccagttacaaccatttccacaacaac
tgctaccgggatgctctggtggccagtgctgtgaactgcctcaccagcttcctctcaggc
ttcgtcatcttcaccgtgctgggctacatggccgagatgagggacgtggaggtggaggat
gttgccagagataaagggcccagcctcctcttcatcacctaccctgaagcaattgccaac
atggtgggatccaccttcttcgccatcgttttcttcctgatgatgatcaccctggggctg
gacagcacgtttggcggcctggaggccgtgatcacggccgtgatggatgagtacccccag
gtcctggcagggcgacgggagctcttcgtgctcggcctcatcacagtctgtttcctgggc
tccctcagcaccctcacctacgggggagcctacgtggtgaagctgctggaggagttcggt
gctggctgctccatcctggccgtggtgctgctggaaaccatcgctgtctcctggttttat
gggatccagaggttctcccacgatgtcaaagccatgctgggcttcaccccggggctcttc
tggaagctgtgctgggtcgccatcagcccagccttgctggcgttcatagtcatcagctcc
ctcctggaccagccacccctgaccctctttgagcaccagtaccccgagtggagcacctca
gtgggattcctcatcggagcatcgtccttcatctgcatccccctctacatggtgtacaag
ctcgtgtggacaccggggtccctcaagcagcgcctcgccgtctgcattcggcccgagaag
ctcctgcgagccccccaggcagagggggtgggcatgacccccgtcctgtag
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