Taeniopygia guttata (zebra finch): 100221866
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Entry
100221866 CDS
T01082
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100221866 (SCFD1)
Membrane trafficking [BR:
tgu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
100221866 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100221866 (SCFD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
100221866
NCBI-ProteinID:
XP_030130437
Ensembl:
ENSTGUG00000011823
UniProt:
H0ZNL2
LinkDB
All DBs
Position
5:35013603..35063908
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AA seq
632 aa
AA seq
DB search
MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESVGTESTPAGARPK
KKNKKSYDLTISDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALMDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNATPKPLGLFSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggatccgggagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctccagttaaaaacagcacaggagaaccagtatggaaggttctcatttatgacaga
tttggccaagatatcatctcacctttgctttcagtgaaagagctgagggatatggggatc
actttgcatctgcttttgcattcagatcgggatgctattccagatgttccagctgtttac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcggaaccagctt
tatgagtcttactatttaaacttcatttctgccatttcaagaagtaaattggaagatatt
gcgaatgctgctataggtgctaatgcagttactcaagtggctaaggtgttcgatcaatat
cttaattttattactttagaagatgatatgtttgtattgtgtaaccaaaacaaagaactt
gtttcataccgtgccattaaccgaccagatataacagacaccgaaatggaaactataatg
gacactattgttgatagtctcttctgtttttttgttacacttggggctatacctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaactggataagaagcttaga
gagaatctaagagatgccagaaacagtctttttacaggtgacacactcggagctggacag
ttcagcttccaaaggcccttattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacttggacataccaagctttagtgcatgatgttctggatttccatttgaat
agggttaacttggaagaatcagtaggaacagaaagtactccagcaggcgctagacctaag
aaaaaaaataagaagtcctatgatttaactatatctgataaattctggcaaaagcataag
ggcagtccttttccagaggtggcagagtctgttcagcaagaactggaatcttacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggcattgaaggggaggatgaagga
gcaataagtatgctttcagataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcatacgaatgttgcaacagccgttttg
gagcacataaagagtcgaaagctggatgtttattttgaatatgaagaaaaaataatgagc
aaatccactctggataaatctcttctggacatgatttctgacccagatgcaggaactcct
gaagacaaaatgcgattatttctcatctattacataagctcagctcaggcaccttcagag
attgacttggagcagtataaaaaagcattgatggatgcaggttgtaatctcgctcctttg
agctacataaaacaatggaaagcttttactaagatggcttcagctccaaccagctatgga
aacgctacacctaaacctttgggtctgttttcacgtgttatgaatacgggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacaaaatctgccagtcacacgtatt
ttggacaaccttatggagatgaagtcaaaccctgagacagatgactatcggtattttgac
cccaagatgctgcgaggcagtgacagctcagttccaagaaataaaaatccattccaagag
gctatagtgtttgtagttggaggaggcaactatattgaatatcaaaatcttattgactac
ataaagggtaaacaaggcaaacatgtcctgtatggctgcagtgaactttttaatgctaca
cagtttataaaacagctgtcccaacttggccagaaataa
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