Taeniopygia guttata (zebra finch): 100221896
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Entry
100221896 CDS
T01082
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100221896 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100221896 (COPB1)
Membrane trafficking [BR:
tgu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100221896 (COPB1)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100221896 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
100221896
NCBI-ProteinID:
XP_002198193
Ensembl:
ENSTGUG00000008435
UniProt:
A0A674GIG4
LinkDB
All DBs
Position
5:complement(11883039..11901660)
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFENLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVPVGPAQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFNAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNVVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagagaatgtgtgttacacgttgatcaatgttcccatggattcagagcca
ccttctgaaatcagcttaaaaaatgacctagaaaaaggagatgtcaagttgaagacagag
gccttgaagaaagtaatcattatgattctgaatggtgagaagctgcctgggctcctgatg
accatcatacgctttgtgctgcctctccaagaccacaccatcaaaaagctgctgctcgtc
ttctgggagatcgttccaaagaccactccagatggcaggctcctgcaggaaatgatcctc
gtgtgtgatgcatacagaaaggacctccagcacccaaatgagtttatccgaggctccact
ctgcgctttctgtgcaagctgaaggaagcagagctgctggagcccttgatgccggccatc
cgcgcgtgcctggagcaccggcacagctatgtgcgccgcaacgccgtgctggccatttac
accatctacaggaactttgaacatcttatacctgatgctcctgaactgatccatgatttc
ttggtgaatgagaaagatgcaagctgcaaaagaaacgcatttatgatgcttattcatgca
gatcaggaccgagctttggattatttgagtacctgtattgaccaagtgcagacctttggt
gacatactgcagttggttattgttgaactaatttacaaggtctgtcacgcgaatccatcg
gagagagctcggttcattcgctgcatctacaacctgctgcagtcctcgagtcctgcagta
aagtatgaggctgcaggtactctggttacactctccagtgcgcccacagcaatcaaggct
gctgcccaatgttacatagatttgattattaaagaaagtgataataatgtgaaactgatt
gtcttggatcggttgattgagctgaaggagcatccttcccacgaacgagtgttgcaggat
ctagttatggacatcctcagagtgttgagcaccccagatctagaagtgcgcaaaaaaacc
cttcagctggctctggatcttgtgtcttcaagaaatgtggaggagcttgtgattgttctg
aagaaggaagtgattaaaactaataatgtgacagagcatgaagatacagacaagtacaga
cagctcctggttcggacactgcattcctgtagtgttcgcttcccagacatggctgcaaat
gttattccagtgctgatggaattccttagtgataacaacgaagcggcagctgccgatgtc
ctggagtttgtgcgggaagcaatccagagatttgaaaacctcagacctcttattgtcgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttatcgaggagcattatgg
atccttggagaatattgcagcacaaaggaggatatacaaagtgtaatgacagaggttcgc
agatcactaggagagatcccaatagtagaatctgaaatcaagaaagaagctggtgaactc
aaacctgaagaagaggtgcctgtgggtccagcccaaaaattagtgacagagatgggcact
tatgcaacacaaagcgctcttagcagttcccgacctgccaaaaaggaagaagacagacct
cccttacgaggattcttgctggatggagatttctttgttgcagcttcccttgctacaact
ttaaccaagattgctttacgttatgtgtccctagttcaggaaaagaagaaacaaaattcc
tttaatgctgaagctatgctgctgatggccactattctccacttgggaaagtcttctctt
cccaagaagccaattacagatgatgatgtggatcgtatttcgttgtgtctgaaagtgttg
tcagaatgttcccctctcatgaatgacattttcaacaaagaatgcaggcagtccctctct
cacatgctgtcagccaagctagaagaggagaaactttcccaaaagaaagaatctgagaag
aggaatgtgacaattcagccagacgatcccatttccttcatgcagctaactgctaaaaat
gaaatgagctcaaaagaagaccagttccagcttagccttcttgcagcaatgggaaacaca
cagaggaaggaggctgctgatcctcttgcttccaaacttaataaggtcactcagctgacg
ggtttctcagaccctgtgtatgcagaagcctatgtccatgtcaatcagtatgacattgtg
ctggatgtgctcgtggtcaaccagaccagtgacaccctgcagaactgcaccctggagctg
gccacgctgggtgacttgaaacttgtggaaaaaccatctcctctgacacttgctccacat
gattttgcaaacattaaagctaatgtcaaagtcgcttcaacagaaaatggaataattttt
ggtaatgttgtgtatgatgtctctggagctgccagcgacagaaactgtgtggttctcagt
gatattcatattgacatcatggattacatccagcctgcttcctgtacagatgctgagttc
agacagatgtgggcggaatttgaatgggaaaacaaagtaacagtgaatacaaatatcatt
gatttaaatgaatacttacagcacatactgaagtcaaccaatatgaaatgcctgactcca
gagaaggccctttcaggctactgtggctttatggcagccaatctttatgcccgttccata
tttggagaagacgccctggccaatgtgagcattgagaagccgattcatctggggccagag
gcgcctgtcacgggccacatacggatccgggccaagagccagggaatggccctgagcctt
ggagataagatcaatctgtctcagaagaagacaagtttataa
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