Taeniopygia guttata (zebra finch): 100221948 Help Entry 100221948         CDS       T01082                                  Symbol PEX1 Name (RefSeq) peroxisome biogenesis factor 1   KO K13338   peroxin-1 Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu04146   Peroxisome Brite KEGG Orthology (KO) [BR:tgu00001]  09140 Cellular Processes   09141 Transport and catabolism    04146 Peroxisome     100221948 (PEX1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tgu04131]     100221948 (PEX1) Membrane trafficking [BR:tgu04131]  Autophagy   Pexophagy    Other pexophagy associated proteins     100221948 (PEX1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA PEX-2N PEX-1N AAA_lid_3 AAA_16 AAA_14 nSTAND3 RuvB_N AAA_5 RNA_helicase TIP49 AAA_28 ABC_tran DUF815 Sigma54_activat AAA_22 AAA_33 AAA_18 NACHT AAA_29 AAA_2 Sigma54_activ_2 TsaE AAA_19 AAA_7 Bac_DnaA ATPase CoaE APS_kinase Parvo_NS1 DUF87 Molydop_binding T2SSE Motif Other DBs NCBI-GeneID:  100221948 NCBI-ProteinID:  XP_030122810 Ensembl:  ENSTGUG00000001478 LinkDB All DBs Position 2:complement(23340941..23366166) Genome browser AA seq 1289 aa AA seqDB search MWGCGDPGGAAAATVVLSGTRDCFLHLPPALASLLRLQQGQAVKVSCAHQPVFLSWMETR HRGHQGENIAEINRHLAEKLGITDGEQVFLEPCSHVSSCQQVEVEPLTADDWEILELHAS SLERHLLDQIRVVFPRAIFPVWVEQHTHVYIRIGTLVPAAPYGRLEPCTELLICPKTHGP EENITSTPATESDILLKNFVKNSMEQKETLKDPFAKQPYLKPGVLEQSKTDENMMFGSNV LPNIWNFIGNIFSNPSEQKQKTSCDNDETSRFKDKLLNLIHMDSIFRVCQSQPPSVQNVS TTHEFLKHNAVHVFPWSLEYIDLDPNPVVSYGRINELLSPRQRHQEAKQNLPLEKQNHLT STQDKKPSNSNSGQASSEGSVVQIVWNGFEDLKSVIEYGHDGGALHVGRVWIADGLRKKL HIEIHSTVRIKSFESIPKIPVSLTLQPKQNLHKDIHEDDVKCAFSSWLQDSTTDDHPWIM TSIDCVHLSIKEGMEEFVLSAAHPVHIEENKSENIFVLNPTLLEKTNIQVLLHPLSRKAD DDNQPPMPDRDKNLPYHKLSDLGGVDKLGTSLFEHISHSLLGRPLSQKLASNAVGLRSGG VLLTGGKGSGKSTLAKAICKEAFTRLDAHVEVIDCKALRGKRLVNIRKHVEEAFLEAAWR QPSILLMDDLDHIVGVPSTPEHENSPETVQSNRLAYVLKDLMKEVISMGSLIALIATSQS EHSLHPSLVSAQGTHVFQCFKCIQSPNQKQRYEILYSIIKKKLNSDPKDFSDLDLQCIAK ETEGFVARDFTMLVDRAIHTCASNQNASDNGDLNLSTVDFQKALKDFTPLSLRNVNLHKP KDLGWDRIGGLKDVKQMLRDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVI ARESGMNFISIKGPELLSKYIGASEQAVRDIFNRAQAAKPCIVFFDEFDSIAPRRGHDNT GVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQNSRC EILKALSHSLSLASDVDFQDVAAKTERFTGADLKALLYNAQLEAIHTNLNLGLTQDFGSS SDSDFSLSSMVFLNHSSGSDDSATDGEAGLEHSLISLDMSDLLPEDPRSNMYRLYFGSSY ESELGNGTPSELSSLCLSGPNSITYDLTSITQRDVASSQPAMLRTASQEGSLENQEQQAE HLRTEINASKANYRSKNGEDSTLNQSVLPKTTITITQSHLLTALQGMRPSISPDDWKHFI ELYDNFQNPKKRKVQIGATFRPGQKMTLA NT seq 3870 nt NT seq  +upstreamnt  +downstreamnt atgtggggctgtggcgaccccggtggagccgccgccgccactgtcgtcctgagcgggacc cgcgactgcttcctgcacctgccacccgcgctggcctcgctcctccgcctgcagcagggc caagctgtcaaagtatcctgtgctcatcagccagtatttttgagctggatggaaaccagg catcgaggtcaccagggtgaaaatattgcagagattaacagacatttggcagagaaactt ggcatcacagatggagaacaggtttttcttgagccctgttcccatgtgtcctcctgtcag caagtagaggtggaaccactcacggcagatgactgggaaattctggaactgcatgcttcc tcccttgaaagacatcttcttgaccagattcgagtggtgtttccaagggccatctttcct gtctgggttgagcagcacacccatgtttacatcagaatcggtacacttgtgccagcagcc ccatatgggagattagagccatgcacagagcttctgatatgtcccaaaacacatggacct gaggagaatatcaccagcacacctgccacagaaagtgacatcttgctcaaaaattttgtg aaaaatagcatggaacaaaaagaaacattaaaggatccttttgccaaacaaccttactta aagcctggagtccttgaacagagtaagactgatgaaaacatgatgtttggctcaaatgtt ctcccaaatatatggaattttatagggaacattttctctaatccatctgagcagaaacaa aagacttcatgtgataacgatgaaacaagccgcttcaaagacaagctgctgaacttaatt cacatggattccatttttagagtatgtcagtcccagcctcccagtgtacagaatgtatcc accactcatgaatttctgaaacacaatgctgttcacgtttttccatggagtttagaatat attgatttggatccaaatcctgtagtatcttatggaagaattaatgagctgctttcccca agacagcgccatcaagaagcaaaacaaaatctgccacttgaaaagcaaaatcatttgact agtacacaagacaaaaagccttcaaattctaatagtggtcaagcatccagtgaaggatct gttgttcaaatcgtttggaatggatttgaagacctaaagagtgtcatagagtatggccac gatggaggagccctgcatgttggaagagtttggattgcagatggtctgagaaaaaaactc catatcgaaatacattcaacagtccgaattaagtcatttgaatctattcctaaaattcct gtatctcttacactgcaacccaaacagaacttacacaaagatatacacgaagatgatgtt aaatgtgcattcagttcttggctgcaggattccactactgatgatcacccatggataatg acaagcatagactgtgtacatctgtctattaaagaaggaatggaggagtttgtccttagt gcagcacatcctgtgcacattgaagaaaataagtctgagaatatttttgtactaaatccc actttgctggaaaagacaaatatacaagttcttttacatcctctaagtagaaaagctgat gatgacaaccagccacctatgcctgatagagacaagaaccttccataccacaaactaagc gatttaggaggagtggacaaattaggaacatctttatttgaacacataagccacagtctt ctggggcgtcctttatctcaaaagctggcttctaatgctgtgggactgcgaagtggaggg gtgcttctcacaggaggaaagggaagtggaaagtcaacattagcaaaggccatctgcaaa gaagctttcactaggctggatgctcatgtagaagtaattgattgtaaagctttaagagga aaaagattagtaaacataaggaaacatgtggaagaagcttttttagaggcagcatggaga caaccatccattcttctgatggatgatcttgatcatattgtcggagtgccttctacacca gagcatgagaacagccctgaaactgttcaaagcaatagacttgcttatgttttgaaagat ctgatgaaagaagttatttccatggggagtttgattgcattaattgccacaagtcagtct gaacattcccttcatccttccctggtttcggcacaaggaactcatgtatttcagtgcttc aaatgtatccaatctccaaatcagaagcaaagatatgaaatactgtattccataataaag aagaaactgaattctgatccaaaggacttctctgatcttgacctccagtgtattgcaaag gaaacagaaggttttgttgctagagattttactatgctggtggatcgtgccattcatacc tgtgcttctaaccagaatgcatcagataatggtgatttgaacctgtcaactgtggatttc caaaaagctctaaaagattttactccattatctctgagaaatgtaaaccttcataaacct aaagaccttggctgggacaggattggtggcttaaaagatgtgaagcaaatgctcagggat accatcatgttacctgcaaagtatccagaattatttgccaacctgcccattcgacagaga tcaggagttctgctgtacggagcacctggaacaggaaagacactcttggcaggagtgatt gcaagagagagtggaatgaatttcatcagcatcaagggaccggagctgctcagcaagtac attggagcaagtgaacaagcagttcgagatatatttaacagagctcaagcagctaagcct tgtattgtgttctttgatgagtttgattctattgctcctcgccgaggtcatgacaacaca ggagtcaccgaccgagtggttaaccagttattgactcagttagatggtgtggaaggcctg caaggagtttatgtgctagctgctaccagtcgcccggatttgattgatcctgctttgtta aggccaggtcgactggataaatgcctgtactgtccacctcctgatcagaattcacgctgt gaaatcttaaaagctctcagtcattccctgtccttggcaagtgatgtggactttcaggat gttgcagcaaaaacagaacggttcacaggggctgacctaaaagctttattatacaatgcc caattagaggcaatccatactaatttaaatttaggtttaacacaggattttggatctagt tctgatagtgacttcagtctctcttccatggtttttctaaaccacagcagtggttcagat gattcagcaacagatggagaagcagggctagagcactctcttatttctttagatatgtct gacttgcttcctgaagatccaaggtccaacatgtatcgtctttattttggaagctcttat gaatcagagctggggaatggaactccttcagaactgagctctttgtgtttgtccggtcca aactccataacttacgacctcactagcatcactcagagagatgttgcatcctcacaacct gcaatgcttagaacagcttctcaagaaggctccctggagaaccaggagcagcaagcagag cacctgaggacagaaatcaatgctagcaaggccaattacagaagcaagaatggagaggac agcacccttaatcagtcagtgcttcccaagaccactataactattacccagtctcatctg ctgactgctcttcagggtatgagaccatccattagtccagatgactggaagcattttatt gaactgtatgataattttcagaatcccaagaagaggaaagtacagattggtgcaacattc agaccaggacaaaaaatgactctagcttag

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