Taeniopygia guttata (zebra finch): 100222127
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Entry
100222127 CDS
T01082
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100222127 (SNAPC4)
03021 Transcription machinery [BR:
tgu03021
]
100222127 (SNAPC4)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
100222127 (SNAPC4)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
100222127 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
100222127
NCBI-ProteinID:
XP_012433802
LinkDB
All DBs
Position
17:8672750..8686555
Genome browser
AA seq
1543 aa
AA seq
DB search
MSGGPGPLRSPRGLDLEAERERIRREIQQLERSLQPGGTDLQLSDCSLSSDGGDEDDDDE
DSYAEMEVEVEGGDSSDDDDDDDDIESLPQDPETCLQMNHVYQDVIKEKIEEVELLVAQN
REQQKEIICELHGPKRAKAGDGRNLRTNVFLGHFMKPYFKDKITGIGPPSNEDAKEKAAQ
GIKSFEQLHSAKWKTAEKTLLQKSVVSDRLQRLLQPKLLKLSYWNQKLEKIKTDIEKDTL
VKQIKDLEQEIEAINQLPESDLIGDRFDEHDWDKISNIHFDGQRRSEELRKFWQNWEHPS
INKNEWTEEELERLKQIAAEHNYLDWQAIAQELGTNRTPFQCLQKYQVYNKDLKKKEWTK
DEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLRKGPWTPEEDAM
LMAAVNKYGEKDWYKIRTEVPGRSDAQCRDRYLKALHWDVKKGKWSLQEEEKLIELVEKH
GLGHWSKIASELPHRTNAQCQSKWKFMIGSKKKRSGAAKRRHAEESSSPSGSSSEELELA
DSSEEEKVTSTTRREEFAVPSIDLWIPTGMDMEGATRERHQIQSLLSAARAGAGSSCCDV
AWAECDGDRAADKPSELSTLLRGIANAHSTDVLVRNPAEVMAKASQCGKHLLQVGLEEVR
AILKKNTSFQRKLMLRPPVSLSAKPPGVAAAAGQDMQGLQELPRRARRSSREHWRRLSLD
RKLLMAVTPWVGNVLLPRTLQAGRMAFHQTKAAAIHEKVQSVSLTSTPLFALLIQLLQID
TKGCMKIIKERQLRQLELLKASPRSPQQASQNTETSSGNSSHSQRNSQQGVPKRSGRRSA
LGAQASPTGASESCAPAGQGAPPAQGQRQKPKTVSELLQEKRLRESQAKAAMQRTVLVAP
QVLVSGPLIIQHPPQQIIPSAQAGSTAAAAAGTDSQVQGSPVPTRTSAAGSASAPVPENH
SSTVPGTGESLGCSQGTHLQSSKELKKEVLESSPEGGVSPGVSPAAAEKAPDQGGCNGQV
TASSSASAVLQSQAFVPHQITVVALGTNKLSLSTPATCGLKSNGPQPRPVSLLPALVTPQ
AASPVIPNSILPFKWVVTPQGLLCSAVQTVVGVPQGMPAAAGGTQGQTAVISSANVSVLG
RTPVPAKANPPHPSSAKTKGPSSQLAGVPLGKAADQSTNLLPVPSVSPGCTTTSSVSAVT
LACSDGSCTAPDSSAPPAASPALSAVVLPQAQPPASSQGSGSQPVPTLSSSGRSSDSITT
KGSSCNPGSIRRGVVLCPGAAAPHSNVPGSSACSGAQALRNRPIASKPPSADVPPQPSTS
RAEKNLLDFSLISLEDQELVKEWMSGKQGVQVPPLQTRLPYLPPFLCSIKTLSKLLLQKT
ALEEQAASLLPSEAGGDGGTGDVFHAIGELVQQKLGDNPAYLMLKARFLAAFTLPAVLAT
LPPPKVTTTLSATGKQLEESDDEEWQCEKKVFEEESCGNELTGVQEHWRLGDEPGDKDAD
LLNQGMGAEESSAWSAWGSCTDVADARAPQSRRSARFRKRRRI
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgggccgggcccgctccgctccccgcggggcctggacctggaggcggagcgg
gagcggatccgccgcgagatccagcagctggagcgcagcctgcagcccggcggcaccgac
ctccagctgtccgactgcagcctcagctccgatggtggtgatgaagacgatgatgatgaa
gattcttatgctgaaatggaagtggaagtggaaggaggagacagcagtgatgatgatgat
gatgatgatgatattgaaagcctgccccaggatccagaaacctgcctgcagatgaaccat
gtgtaccaggatgttatcaaggaaaagattgaggaggtggagctgcttgttgcacaaaac
agagagcagcagaaggaaatcatatgtgagcttcatggtccaaaaagagccaaggcagga
gatggcagaaatctacgaacaaatgtgtttttgggtcattttatgaagccatactttaag
gataaaataacaggaattggccctccttccaatgaagatgccaaggaaaaggcagctcag
ggcataaaatcctttgaacagctgcattcagccaagtggaaaactgcagagaagacactg
ctgcagaaatccgtggtgagcgatcgcctgcagcgcctgctccagccaaagctgctcaag
ttgagttattggaatcagaaactggagaaaatcaagactgacatagaaaaagacaccttg
gtaaagcaaatcaaagacttggagcaagaaatagaagcaattaaccaactcccagaaagt
gacttaataggagacagatttgatgagcacgactgggacaaaatttcaaacatccatttt
gatggccaacgtcgctcagaagaactgaggaagttttggcaaaattgggagcatccaagc
atcaacaaaaacgaatggactgaggaggaactggagaggctgaagcagatagctgctgaa
cacaactacctggactggcaggccattgcccaggagctggggacaaacaggacacctttc
cagtgcttgcagaaataccaagtctataacaaagatttaaaaaagaaagaatggaccaag
gacgaggatcagatgcttttagagcttgttcaagagatgagggtgggaagccatatccca
tacaagaaaattgcttattacatggaaggaagagactctgctcagctgatttaccgctgg
acaaagagtgtggaccccagcttgaggaaaggaccctggacaccagaggaagatgctatg
ctgatggctgcagttaacaagtatggggagaaggactggtacaaaatccggacggaagtg
ccgggcaggagcgacgcccagtgccgggaccggtatttaaaagcattgcactgggatgta
aagaaaggcaagtggagcttgcaggaagaggagaagctgattgaactggttgaaaagcat
ggcctgggtcactggagtaaaatagcttcagagctgccacatcggactaatgcccaatgc
cagagcaagtggaaattcatgattggctctaagaagaagagatctggggcagccaaacgg
cgccacgctgaggagagctccagcccttctgggagcagcagtgaggagctggagctggca
gacagctcagaggaggagaaggtgaccagcaccacgagaagagaggagtttgcagtcccc
agcattgacctgtggataccaacagggatggacatggaaggggcaaccagagagagacac
caaatccaatccctcctctctgctgccagggctggcgcagggagcagctgctgtgatgtt
gcatgggcagagtgtgatggagacagagctgctgataaaccatctgagctgagcaccctg
ctgaggggcattgcaaacgcccattccacagatgtgctggtgaggaatccagcagaagtg
atggccaaggcttcccagtgtggaaaacacctgctgcaggttggcctggaggaagtgaga
gcaatattaaagaagaacacgagctttcagaggaaactgatgctaagacctcctgtcagc
ctttcagccaagccccctggcgtggctgcagctgctggccaggacatgcaggggctgcag
gagctgcccaggagagctcggcgctccagcagggagcactggaggcggctgagcctggac
aggaagctgctgatggcagtgaccccttgggtgggcaatgtgctgctgccccgcaccctg
caggctgggaggatggctttccaccagacaaaagctgctgctattcacgagaaggttcag
tcagtcagtctcaccagcactcccctgtttgcactgctcattcagctcctccagattgat
actaaaggctgtatgaagattattaaggagagacagctgaggcagttggagctgcttaag
gctagtccaaggagccctcagcaggcttcccaaaatacagagacttcttcaggcaactca
tcccattctcagaggaattcccagcagggcgtcccaaaaaggtctggcaggagatctgcc
ctgggagcacaggccagccccactggtgcctcggagagctgtgccccagctgggcaggga
gctcccccagcccagggacaaaggcagaagccaaaaactgtctcagaattgctgcaagag
aaacgtttgagggagtcccaggccaaggcagccatgcagaggacagtgctggttgcccca
caggtgctggtttcagggcctttgataatccagcacccaccacagcaaatcattccctct
gcacaagcagggagcacagctgcagcagctgctgggacagatagccaagtacagggttca
ccagtgcccacaaggacttctgctgcaggttctgcttctgctcctgtgcctgaaaaccat
tcctcaacagtgccaggaactggggagagccttggctgctcacaagggacacatctacag
tcaagcaaggaactaaaaaaggaagttctggaaagcagccctgaaggaggggtttctcca
ggtgtgagtccagctgcagcagagaaggcccctgaccagggagggtgcaatggtcaggtc
acagccagtagctcagcttcagcagtgttgcaaagccaggcttttgtgcctcaccagatc
acagtggtggctcttggcaccaataaattgtccctttccacaccagccacctgtgggctg
aagagtaatggaccacagccgaggccagtcagcctgctgcctgctcttgtcactccacaa
gctgcttctcctgtgattcccaacagcatcctgcccttcaagtgggttgtaactccccag
ggtctgctctgcagtgctgtgcagactgtggtgggtgttccccagggaatgccagctgct
gctgggggaactcagggtcagacagctgtgatttccagtgccaatgtttctgttttggga
aggactcctgtaccagctaaagcaaatccacctcaccccagcagtgcaaagacaaaaggg
ccaagttcccagctggcaggagttcctttgggaaaggcagctgaccagtccacaaatctc
ttacctgtgccctcagtgagtcctggatgcaccaccacatccagtgtttctgctgtaacc
cttgcatgttcagatggctcctgcacggctccagactcctctgcccctccagctgccagc
ccagccctgagtgccgtggtgctgccccaagcacagccccctgccagctctcagggctct
ggttcccagcctgtgcccactctcagcagctcggggaggagcagtgactccatcacaaca
aagggatcatcctgcaatccaggcagcatcaggagaggggttgtgctgtgtccaggagct
gcagctcctcacagcaatgtcccagggagctctgcctgctctggtgcccaggcactgagg
aacagacccattgcctccaaaccaccgagtgctgacgtccctccccagccaagcacctcc
cgtgcagagaagaatctccttgacttcagcctgatctccctggaggaccaggagctggtg
aaggagtggatgagtgggaaacaaggggttcaggtgccaccactgcagaccaggctgcct
tatctgccacctttcctctgcagcataaaaaccctctcaaagctccttctgcagaaaaca
gctctggaggagcaagcagcctctctcctgccctctgaggccggtggggatgggggcact
ggggatgttttccatgctattggagaactggtgcagcagaaactgggtgataaccctgct
tacctcatgctgaaagccagattcctggcagccttcacactcccagctgtcctggcaact
ctgcctcctcccaaagtgacaacaactctgtcagccaccgggaagcaacttgaggagagt
gatgacgaggagtggcagtgtgagaaaaaagtgtttgaggaagagagttgtgggaatgaa
ttaacaggagtacaggagcactggagacttggggatgagcctggagataaagatgctgat
ttactaaatcagggcatgggggctgaggagagctctgcttggtctgcctggggctcctgc
actgatgtggctgatgccagagctccccaaagcaggagaagtgcccgcttcaggaagagg
aggaggatatga
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integrated database retrieval system
