Taeniopygia guttata (zebra finch): 100222193
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Entry
100222193 CDS
T01082
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100222193 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100222193 (MYO5B)
04131 Membrane trafficking [BR:
tgu04131
]
100222193 (MYO5B)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100222193 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100222193 (MYO5B)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100222193 (MYO5B)
mRNA cycle factors
P-body specific factors
100222193 (MYO5B)
Membrane trafficking [BR:
tgu04131
]
Others
Actin-binding proteins
Myosins
100222193 (MYO5B)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100222193 (MYO5B)
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100222193 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
5_3_exonuc
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100222193
NCBI-ProteinID:
XP_032599959
LinkDB
All DBs
Position
Z:complement(1457601..1604694)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSAAQLYTKYTRVWIPDPDEVWRSAEIIKDYKVGDKSLQLKLEDETLYEYPIDLQGSELP
FLRNPDILVGQNDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYE
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSASETNIEAKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLGLTCAEDFFYTSQGGDTSIDGVD
DADDFEKTRHAFTLLGVKESHQMTIFRIIAAILHLGNLKIQGERDGEVCSVSSEDEHLKN
FCSLLGVEHSQMQHWLCHRKLVTTAETYVKSMSLHQVVNARNALAKHIYAQLFNWIVQHV
NKALHTTVKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EAIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHAASQHFQK
PRMSNTSFIVLHFADKVEYQSEGFLEKNRDTVYEEQINILKASKYQMVADLFQEEKDAVP
TTAVPKRAPRINVRSAKPAFKAANKEHRKTVGHQFRNSLQLLMETLNATTPHYVRCIKPN
DEKLPFKFDPKRAVQQLRACGVLETIRISAAGFPSRWSYTDFFNRYRVLMSKRDLSKNDK
KQICQTLLEELIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLER
TRFRRLRRATLTLQCYTRGHLARRLFEHLRRTRAAIILQKQYRMLRMRRAFLRVRSAALT
IQAFARGMFVRRIYRQMLMEHKATILQRYARGWLARARFRRARAAAVVLQCHWRRLKARR
QLQALRIEARSAQHLKKLNIGMENKVVQLQRKVDEQNKENKLLNEQLSMLTSAHSSEVEK
LKKELQQYQQTQQGDGKQLLSLQEETERLQMELKRAHGEKEVMEDSHSKERDLLKKRISD
LEEENALLKQEKEELNSKILRQSEDEFARNTVEENMQMKKELEEERSRYQNLVKEYASLE
QRYDNLRDEMSIFKQTPGHRRNPSNQSSLESDSNNPSICTSEIGDTEDVIQQVEEIGMEK
AAMDMTLFLKLQKRVRELEVERKKLQAQLEKKEQESKKSQVIEIKTEVTSEHEDFAYNSL
KRQELESENKKLKNELNELRKAIADHATQNNSANDVQDGYSLLLNQLKSANEELEVRKEE
VLILRSQIMKAAQQKEMGKNMVKKRESISPSASWPNSDRHVDQEDAIEAYQGICETNRKT
EDWGYLNEDGELGLAYQGLKQVARLLEAQLQEQRREHEEEMEALKNQVDFMQEELEKQQQ
AFLQTLQLSPEVQVEFGLQQEITRLTNENLDLKELLEKLEKNEKKLKKQLKIYMKKVHDF
EASQTMVPVERRLHERNMQVAVQRKEKDFQGMLEYYKEDEPLLIRNLITELKPQAVSATV
PCLPAYILYMCLRHADYINDDQKVHSLLTSTINGVKKVLKKHQDDFEMTSFWLANMCRLL
HCLKQYSGEECFMTQNTAKQNEHCLKNFDLTEYRQVLGQLSIQIYQQLIKIARGILHPMI
VSAVLENESIQGLSSVKTVGYRKYSSNAGDICYSLDEMIHELNTFHSIMCDQGLDPEIIQ
QVFKQLFYMINAITLNNLLLRKDVCSWSTGMQLRFNISQLEEWLRGKNLQQSGAAQTLEP
LIQAAQLLQLKKKTWEDAEAICSLCTSLTTHQIVKILNLYTPVNEFEERVTVAFIRDIQT
QLQGRNDPTQLLLDFKHLFPVLFPFNPSAITMDSIHLPASLNLDFLNKV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcagctctacaccaagtacactagggtttggattcctgaccctgatgaa
gtttggagatcggcagaaattatcaaggattacaaagtgggagataaaagcctccagctg
aaacttgaagatgaaactctctacgaataccccattgacctccaagggagcgaactgccc
ttcctacgtaatccagacatcctggtggggcagaatgacctgacagccctgagctacctg
cacgagcctgcggtcctgcacaacctcaaagtcaggttcctcgagtccaaccacatctac
acctactgtggtattgtgctggtggccatcaatccctatgaacagctgccaatctacgag
caggatgtcatctacgcctacagcggccagaacatgggggacatggacccccacatcttc
gccgtggccgaggaagcctacaagcagatggccagggatgaaaagaaccagtccatcatc
gtgagcggggagtcgggggcgggcaagacggtctcagccaaatacgccatgcgcttcttc
gccaccgtcgggggctccgccagcgagaccaacatcgaagccaaagtcctggcctccagc
cccatcatggaggccattggaaatgctaaaacaacaagaaatgacaacagcagccgcttt
gggaaatacattcagattggctttgataaaagataccacatcattggtgccaacatgagg
acatatctgctggaaaaatctcgggttgtatttcaggcagaggacgagcgcaactaccac
atcttctaccagctctgtgcttcctcaagcctcccggaattcaaagaccttggactcaca
tgtgccgaagacttcttctacacttctcagggaggtgacacatccatcgatggtgtggac
gatgctgatgactttgagaaaaccagacatgccttcaccctgcttggagtgaaggagtct
catcagatgaccatttttaggataattgctgccattctgcacctggggaacttgaaaatc
caaggggaacgagatggggaggtctgcagtgtgtcgagtgaggacgagcacctgaaaaac
ttctgcagcctgctgggtgtggagcacagccagatgcagcactggctctgccaccgcaag
ctcgtcaccacggccgagacctacgtgaagagcatgtccctgcaccaggtggtgaacgcc
aggaacgccctggccaagcacatctacgcccagctcttcaactggatcgtgcagcacgtc
aacaaagccctgcacaccactgtgaagcagcactccttcatcggcgtgctcgacatctac
gggtttgaaacttttgaagtgaatagctttgaacagttctgtatcaactatgccaacgaa
aagctccagcagcagttcaactcgcatgtgtttaagctggaacaagaggagtacatgaag
gaggcaatcccttggactctcatagacttctacgacaaccagccctgcatagacctgata
gaagccaagcttgggatcctggacctgctggatgaagagtgcaaggtgcccaagggcacg
gaccagaactgggctcagaagctgtacgaccgccacgccgccagccagcacttccagaag
ccgcgcatgtccaacacctccttcatcgtcctgcacttcgctgacaaggtggagtaccag
agcgaggggtttctggagaagaacagggacaccgtgtacgaggagcagatcaacatcctg
aaggccagcaagtaccagatggtagcagacttattccaggaggagaaggacgccgtgccc
accactgccgtgccaaagagagcgccccggatcaacgtgcgctctgccaagccagccttc
aaagctgccaacaaggagcacaggaaaacagtggggcaccagttccgcaactccctgcag
ctgctgatggagaccctgaacgccaccaccccgcactacgtgcgctgcatcaagcccaac
gatgagaaactccccttcaagtttgatccgaagagagcagtgcagcagctgagagcctgt
ggagtgctggagaccatccggatcagtgcagctggcttcccatccaggtggtcctacact
gattttttcaatagataccgtgtgcttatgagcaagagagacctctctaagaacgacaag
aagcagatctgccagaccctgttggaagagctcattaaggatccagacaagttccagttt
ggccgtaccaagatctttttccgtgcaggccaggtggcatatctggagaaactgcgggca
gataagttcagagctgccaccatcatgatccagaagacagtgaggggctggctggagagg
accaggttccggaggctgagacgagccaccctcactctgcagtgctatacccgcgggcac
ctggcacgcaggctctttgaacacctgaggaggacgagggctgccatcatcttgcagaag
caataccgaatgctgcggatgcgccgggccttcctgagggtccgcagcgccgccctcacc
atccaggcttttgctcggggcatgtttgtcaggaggatttaccgccagatgctgatggag
cacaaggccaccatcctgcagaggtacgcgcggggctggctggcccgcgcgcggttccgc
cgggcccgggctgccgccgtggtcctgcagtgccactggcggcgcctcaaagcccggcgc
cagctccaggcgctccgcatcgaggcacgctcggcacagcacctcaaaaagctcaacatc
ggcatggagaacaaggtggtgcagctgcagaggaaggtggatgagcagaacaaggagaac
aagcttctgaatgagcagctgtccatgctgacatcagcccactcctccgaggtggagaag
ctgaagaaggagctgcagcagtaccagcagacccagcagggtgatggcaagcagctcctc
agcctgcaggaggagacggagcggctgcagatggagctgaagagggctcacggggagaag
gaggtcatggaggacagccacagcaaggagagggacctgctgaagaagcgtatctctgac
ctggaagaagaaaacgctctcctgaagcaggaaaaagaggagctgaacagcaagattctc
cgtcagtctgaagatgaatttgcacgaaacacagttgaggaaaatatgcagatgaagaaa
gagctggaggaagagagatctcgttatcagaacctggtaaaagagtatgcaagtctggag
cagagatatgacaacttgagggatgaaatgagtatttttaagcagacaccggggcacagg
agaaacccatccaaccagagcagcttggagtctgattccaataacccatccatctgcacc
tctgagatcggggacacggaggatgtgatccagcaggtggaggagattgggatggagaaa
gcagccatggacatgaccctcttcctgaagctacagaagagagtgagggagcttgaggtg
gagaggaagaagctgcaagcccagctggagaaaaaggagcaagagagcaagaaatcccag
gtaattgaaataaagactgaagtgacttcagaacatgaagattttgcatacaacagcctg
aagaggcaagagctggagtcggagaacaagaagctgaaaaatgagctgaatgagctgagg
aaggccatcgcagaccacgccacgcagaacaactccgccaacgacgtgcaggacggctac
agccttcttctgaaccagctgaaatcagccaacgaggagctggaggtgcgcaaggaggag
gtgctcatcctcaggtcgcagatcatgaaggcagcccagcagaaagagatggggaaaaac
atggtaaagaagagggagagcatctcccccagtgccagctggcccaacagtgaccggcac
gttgaccaggaggacgcgatcgaagcctaccagggcatatgcgagaccaaccgcaagact
gaggactggggctatctcaatgaagatggagagctcggcttggcttatcaaggtttaaag
caagttgccaggttgctggaagcacagctccaggagcagagaagggagcacgaggaggag
atggaagctctgaaaaaccaggtggatttcatgcaagaggagctggagaagcagcagcag
gcattcctgcaaactctgcagctctctccagaggtccaggtggagtttggacttcagcaa
gaaattacacgtctgaccaatgaaaacctggatcttaaagaattgctggaaaagttggaa
aagaatgaaaagaagctgaagaagcagctgaagatttacatgaagaaggtccatgatttt
gaagcatcccagacaatggtgccagtggagaggaggctgcacgagcggaacatgcaggtt
gctgtgcagaggaaggagaaggattttcagggcatgctggaatattacaaagaagatgag
ccactcctcatccgaaacctcattacagagctcaagccccaggcagtgtctgctactgtt
ccctgccttcctgcttacatcctctacatgtgcctcagacacgcagactacatcaatgat
gaccagaaggtgcactccttgctcacctccaccatcaacggtgttaagaaagtgctgaag
aagcaccaggatgactttgagatgacatcgttctggctggcgaacatgtgccgcctgctg
cactgcctgaagcagtacagcggggaagagtgcttcatgacccaaaacacggcaaagcag
aatgagcactgcctgaagaacttcgacctgaccgagtaccgccaggtgctgggccaactc
tccatccagatctaccagcagctcatcaaaattgcacgaggcatcctgcaccccatgatc
gtgtctgctgtgctggaaaatgagagtatccaagggctttccagtgtcaaaacggtgggc
tacaggaaatactcctccaatgcgggtgacatctgctacagcttggatgaaatgattcac
gagctgaacacgttccacagcatcatgtgtgaccagggcctggacccagagatcatccag
caggtgttcaagcagctcttctacatgatcaatgccatcaccctgaacaacctcctgctg
aggaaggatgtctgctcatggagcacgggcatgcagctgaggtttaacatcagccagctg
gaggaatggctgcgtgggaagaatctgcagcagagtggagcagcacaaactttggagccc
ttgattcaggcagcacagctcctgcagctgaaaaagaaaacctgggaggatgctgaggcc
atctgctccttgtgcacatcactcacgacccaccagattgtaaagatacttaatctctac
actcctgtgaacgagtttgaagaacgtgtgacagtagcattcatacgagacatacagacg
cagttgcaaggacggaatgaccctacacagctgctgttagacttcaagcacttgttccca
gttctgttcccattcaacccatctgccatcaccatggactccattcatctccctgcgtct
ctcaacttggattttctcaataaagtctga
DBGET
integrated database retrieval system
