Taeniopygia guttata (zebra finch): 100222208
Help
Entry
100222208 CDS
T01082
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgu01009
]
100222208 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100222208 (CTDP1)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100222208 (CTDP1)
Protein phosphatases and associated proteins [BR:
tgu01009
]
HAD phosphatases
Fcp/Scp phosphatases
100222208 (CTDP1)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100222208 (CTDP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCP1_C
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
Nairovirus_Gn
Motif
Other DBs
NCBI-GeneID:
100222208
NCBI-ProteinID:
XP_030121467
Ensembl:
ENSTGUG00000006649
LinkDB
All DBs
Position
2:71810628..71906454
Genome browser
AA seq
871 aa
AA seq
DB search
MKGLCAECGQDLTQIRSKYGKQSVPLSTATVSMVHSVPELKVSSEQAEQLGREDQQRLHR
NRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKL
YELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCGDSMVC
IIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREMQMKKKANHSTKPEALDSAVIS
AKDVEEIQNVMCAEEHSNGLKKTAEDTCTENGSTPVSSETSDGDVNSHNKVNAQDSLNDS
IGHRMDSKVTDDLANTKESQNFSEQVDTTVTEKQQTQEKINDLDFELSSDSESDDGVDSK
KSSTSVSDSENEEKRSWKKSKQPLQDENLQQESCTGTSEKKDGLVNCSGDTQSLPSENIQ
EKIDHEAQEESEQESLCDLGNGSGDKKEAETESQISEQSGITMGESLDQSMEEEEEEDDT
DDDDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVTIIFSGL
YPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQDCKDLH
VVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPATFPDTPSTFQTALFHPTPIHPK
SQPGPEVRIYDPNTGKLIRKGTQTSGQSMYIQSPAPPITLPVHGEHSSFRVVQPHQQQMF
EEDDLPGSENEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDESDTE
KKKTEEEGERPQTCATETLGRKSDQRPGSSSSSSSERSLTGSVPRGYKRKLDEDDAASET
SKESSNEDEEGSSSEADEMAAALEAELNHFM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttgtgtgcagaatgtggccaagatttaactcagatacgaagcaagtatggg
aaacagagcgtgccattatccacagcaactgtatcaatggttcacagtgtcccagaactg
aaggttagctctgagcaagctgagcagctgggaagagaagatcaacagcgactacatcga
aatagaaaactggtgctcatggtagatttggaccagacattgatccatactacagaacag
cactgccagcaaatgtccaataagggaatatttcatttccagttaggtcgaggtgagcct
atgttgcacacacgtttgcgtcctcattgtaaggaattcctggaaaaaattgccaagctc
tatgaattacatgtttttacttttggcagcagactgtatgcacatacaattgcaggattt
ttggaccctgaaaagaagcttttttcccatcggatattgtcaagggatgaatgtatcgat
ccattttctaaaactgggaaccttagagatctctttccttgtggagattccatggtctgc
atcattgatgatagagaggatgtttggaagtttgcacccaatttgataactgtgaagaaa
tatgtatactttcaggggataggagatattaatgcacctcctggatcaagagaaatgcaa
atgaagaagaaagcaaaccactctacaaaacctgaagcattggattcagcagtgatttca
gcaaaagatgttgaagaaatacagaatgttatgtgtgcagaagaacacagtaatggtctc
aagaaaactgcagaggacacttgcactgaaaatgggagtactcctgtaagcagtgaaaca
tctgatggggatgtgaactctcataataaagttaatgcccaggactccttaaatgatagc
attggtcacagaatggacagtaaggtcactgatgatttggcaaacacaaaagaatctcag
aatttttccgaacaagttgatacaacagttacagagaagcagcaaacccaagagaagata
aatgatttggactttgaactatctagtgacagtgaaagtgatgacggagtggatagcaaa
aagtcatccacttctgtatcagatagtgagaatgaggaaaagagaagttggaagaagtcc
aaacaacctctgcaggatgaaaatttgcagcaagagagttgcactggtacgagtgagaaa
aaggatggtctggtgaactgttctggggacacacagtctttgcctagtgaaaatatccag
gaaaaaattgatcatgaagcacaagaggaaagtgaacaggaaagcctttgtgatttagga
aatgggtctggagacaagaaggaagctgaaacagaatcacagattagtgaacagtctgga
attacaatgggtgagtccttagatcagagcatggaggaggaagaggaggaagatgataca
gatgatgatgaccatttaatataccttgaggagatcctggtgcgagttcacactgattac
tacacaaagtatgataaatacctgaaaaaagagattgaggaaattccagacatcagaaaa
atagtaccagaactaaaaagtaaagtcttggcagacgtaaccataatatttagcggactt
tacccaacaaacttccctattgaaaagacacgggaacactatcatgccacagcacttgga
gctaaaattgtgaagaatctcgtacttagtgctgatgatcctgataaagcaacacatcta
attgcagcaaggactggcacagaaaaagtacggcaagctcaggactgcaaggatctccat
gttgtaaaccctgactggttgtggagctgcctagagcgctgggacaaggttgaggaacag
ctctttcccttaaaggatgactacatcaaaacacacagagaaaatagccctgccacattt
cctgatacacccagcacatttcagactgctctgtttcacccaacacctatccatccgaag
tctcaacctggtcctgaagttcgaatttatgatcctaacactggaaagctgatcaggaaa
ggcacacagacatctgggcagtcaatgtacatccagtctcccgctcctcccatcactttg
ccagtccacggtgaacactcatccttcagagttgttcagccacatcaacagcagatgttt
gaagaagatgacctaccaggaagtgaaaatgaagagcagcctggtccatctaagaggaaa
cgccagccaagtatgtctgaaacaatgcccctgtacactctatgtaaagaggatttagag
agtatggataaagaggtggatgacatcttaggagaaggcagtgacgaaagtgatactgaa
aaaaaaaagacagaagaggaaggtgaaagacctcagacttgtgcaacagagactctaggg
aggaagtcggatcagagacctggatcatcatcgtcgtcatcaagcgaaagaagcttaaca
ggcagcgtacccaggggttacaagcgcaaactggatgaagatgatgctgccagtgaaacc
agtaaagaatccagcaatgaagatgaggaaggaagcagttctgaagcggatgaaatggca
gcagcacttgaagctgaactgaaccacttcatgtga
DBGET
integrated database retrieval system
