Taeniopygia guttata (zebra finch): 100222243
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Entry
100222243 CDS
T01082
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu02010
ABC transporters
tgu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100222243 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100222243 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100222243 (CFTR)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
100222243 (CFTR)
Transporters [BR:
tgu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
100222243 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
T2SSE
RsgA_GTPase
DUF87
MeaB
NTPase_1
AAA_23
Motif
Other DBs
NCBI-GeneID:
100222243
NCBI-ProteinID:
XP_030113157
Ensembl:
ENSTGUG00000004828
UniProt:
A0A674GQX0
LinkDB
All DBs
Position
1A:complement(23556287..23643900)
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPLEKANIFSKLFFRWTNPILKKGYRRRLELSDIYQIPSADSADNLSEKLEREWDRE
LATSEKKPKLINALRRCFFWKFMFYGIVLYLGEVTKSVQPLLLGRIIASYDPDNSDERSI
AYYLGIGLCLLFFVRTLLIHPAIFGLHHIGMQMRIAMFSLIYKKILKLSSRVLDKISTGQ
LVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLLWDMLEASAFSGLAFLIVMVLFQAW
LGQMMMKYRNKRAGKINERLVITSETIENIQSVKAYCWEDAMEKMIENIRETELKLTRKA
AYVRYFNSSAFFFSGFFVVFLAVLPYAVIKGITLRKIFTTISFCIVLRMTVTRQFPGSVQ
TWYDSIGAINKIQDFLLKKEYKALEYNLTTTGVELDKVTAFWDEGIGELFVKAKQENNTS
KAPSTDSNLFFSNFPLHASPVLQDINFKIEKGQLLAVSGSTGAGKTSLLMLIMGELEPSQ
GKIKHSGRISFSPQVSWIMPGTIKENIIFGLSYDEYRYRSVIKACQLEEDISKFPDKDYT
LLGEGGIILSGGQRARISLARAVYKDADLYLLDSPFGHLDIFTEKEIFESCVCKLMANKT
RILVTSKLEHLKIADKILILHEGSCYFYGTFSELQGQRPDFSSELMGFDSFDQFSAERRN
SILTETLRRFSIEGEGMGSRNEIKKQSFKQKSDFNDKRKSSVIINPLNANRKFSVVQKNG
MQVNGLEDGHSDPAERRLSLVPDVEQGDVALLHSGMLKADHLLQGRRRQSVLNLMTSTAV
NYGPNFSKKGSTTFRKMSMVPQTNLSSEIDIYTRRVSRDSVLDITDEISEEDLKECFSDD
AESMGTVTTWNTYFRYVTIHKKLIFVLILCVTVFLVEVAASLGGVWFLQKTALKANSSQS
ENSTSDKPPVIVTDTSSYYIVYIYVGVADTLLAMGIFRGLPLVHTLITVSKTLHQKMVHA
VLHAPMSTFNSWKAGGMLNRFSKDTAVLDDLLPLTVFDFIQLILIVIGAITVVSILEPYI
FLASVPVIGAFILLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFE
TLFHKALNLHTANWFLYLSTLRWFQMRIEIIFVVFFVAVVFISIITTGEGPGTAGIILTL
AMNIMGTLQWAVNSSIDVDSLMRSVGRIFKLIDMPTEETKSIKPQKNNQFSDALVIENRH
VKEEKNWPSGGQMTVKDLTAKYGDGGAAVLENISFSISSGQRVGLLGRTGSGKSTLLFAF
LRLLNTEGDIQIDGVSWNTVSVQQWRKAFGVIPQKVFIFSGSFRMNLDPYGQWNDEEIWK
VAEEVGLKSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLD
PVTSQVIRKTLKHAFANCTVILSEHRLEAMLECQRFLVIEDNRLRQYESIQKLLNEKSSF
RQAISHAERLKLLPAHHRNSSKRKPRPQITALQEETEEEVQETRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtctcccctggagaaggcgaacatcttctccaaacttttcttcagatggaca
aaccccattttgaaaaagggttacagacgacggttggagctctcagatatttatcaaatc
ccttctgcagactctgctgataatctttctgaaaaactggaaagagaatgggacagagag
ctggcaacttcagagaagaaacccaaactcataaatgctcttcggcgatgctttttctgg
aaatttatgttctatggaatagttttatatttaggggaagtcaccaaatctgtgcaaccc
cttctgctggggagaataatagcttcttatgatccagacaactctgatgaaagatccata
gcctactacctgggcattggcttgtgccttctcttttttgtgagaacactgcttatacac
cctgctatatttggtcttcatcatattggaatgcaaatgaggatagctatgtttagcttg
atttataagaagatcctaaaactctcaagcagagttctagataaaataagtactggacaa
ttggtcagtcttctttccaacaatctgaacaaatttgatgagggtcttgctctggctcat
tttgtatggattgcaccattacaagtggcactactgatgggattgctctgggatatgtta
gaagcttctgcattttctggacttgcttttctaatagtcatggtcttattccaagcctgg
ctgggacaaatgatgatgaaatacaggaataagagagcaggaaagatcaatgagagactt
gtcatcacctcagaaacaattgaaaatatacagtcagttaaagcctattgttgggaagat
gcaatggaaaaaatgattgaaaacatccgtgaaactgaactgaagcttacccgaaaagct
gcttatgtgagatatttcaacagctcagccttcttcttctcgggcttttttgtggtgttc
ttagctgtgcttccgtatgctgtgattaaaggaattactctccgaaaaatattcaccacc
atttccttctgcattgttcttcgaatgacagtgaccaggcagtttcccggctctgtacag
acctggtatgactctattggagcaataaacaaaatacaggatttcttgctgaaaaaagaa
tataaagctctggagtataatctaacaaccactggggttgagctggacaaagtaacagct
ttttgggatgagggaattggagagctatttgtaaaagcaaagcaggaaaacaacaccagc
aaagctcctagcactgacagcaatctcttcttcagtaattttccccttcatgcctctcct
gttcttcaggatataaatttcaagattgagaaggggcagctattggctgtttctggatcc
actggagcaggcaagacttctcttctgatgttgataatgggagaactggagccttcgcag
ggtaaaattaaacacagtggaaggatatccttttcacctcaagtctcctggatcatgcct
ggaacaataaaagagaacataatttttggtttatcctatgatgaataccgatacaggagt
gtcatcaaagcctgccaactagaagaggatatttccaagttcccagacaaagattataca
cttctgggtgaaggtggaatcattctgagtggaggtcagcgagcacggatctcactggca
agagcagtgtacaaagatgctgatttgtatctcctggattctccttttggacacttagac
atttttacagaaaaagagatatttgaaagctgcgtgtgcaagttgatggcaaataaaacg
aggatcttggttacatcaaaactggaacacttaaagattgctgacaaaatattaatctta
catgaagggagctgctatttctatggaacattttctgaacttcagggtcaacggccagac
ttcagctcagagctgatgggatttgactcttttgatcagttcagtgcagagagaagaaat
tcaatccttactgagactctcagacgattttccattgaaggagaaggcatgggatcacgc
aatgaaataaagaagcagtctttcaaacaaaagtcagattttaatgacaaaaggaagagc
tctgtaattattaacccccttaatgcaaacaggaagttctcagtagtgcagaagaacggg
atgcaggtcaatgggctagaggatggccacagtgacccagcagagaggaggctctcgctg
gtacccgacgtagagcagggggacgtggctctgctgcactctggcatgctcaaggctgac
catctgctgcaagggcgcaggaggcagtcggtgctgaacctgatgacaagcaccgctgtg
aactacggaccaaacttttccaaaaagggaagtacaacgttccggaaaatgtctatggtg
cctcagacaaacctgtcctctgagatagatatctacaccaggcgtgtgtctcgagacagt
gtcttggatataactgatgaaatcagtgaagaggatttgaaggagtgcttcagtgatgat
gctgaaagcatgggtactgttactacatggaatacttatttcagatatgttactatccac
aaaaagttgatttttgttctgattctgtgtgtgactgtcttcttagttgaggtagctgct
tctcttggtggggtatggtttcttcaaaagacagctttgaaggcaaattcatcacagtca
gaaaacagcacctctgacaaacctcctgtgattgtcactgacactagcagctactacatc
gtttacatctatgtgggtgtggcagataccctgcttgccatgggaatctttagaggtttg
ccccttgtgcatacacttataacagtgtctaaaactcttcatcaaaagatggtgcatgca
gttcttcatgcacctatgtcaaccttcaactcttggaaagcaggtggaatgcttaacaga
ttctcaaaagatacggcagtactggatgacttacttccactcacagtatttgacttcatt
cagttaatactgattgtgattggcgctataacagtagtctcaatattagaaccctacatc
ttcctggcatcagtgcctgtgataggagcctttattctgttaagggcatacttcctccac
acttctcagcagctgaaacaactggaatctgaagctcggagtccaatcttcacccatctt
gttacaagcttaaaagggctgtggacactgcgagcgtttgggcggcagccgtattttgag
accctctttcacaaagctctgaacctacacacagcaaactggttcctctacctgtcaaca
ctgcgctggttccaaatgaggatagaaattatttttgttgtcttttttgttgctgtggta
tttatctctatcataactacaggtgaaggaccaggtacagctggaattattcttacttta
gctatgaacatcatgggaaccttgcagtgggcagtaaactcaagcatagatgttgatagt
ttgatgcggtctgtcggacgaatatttaaattaattgacatgccaacagaagagacaaaa
agcattaagccacagaagaataatcagttttcagatgcccttgtaatcgaaaacaggcat
gtgaaggaagagaagaactggccatctgggggccagatgactgtgaaagaccttacagcc
aaatacggtgatggaggagctgctgtactagaaaacatttccttttcaataagttcaggg
cagagggtgggccttttaggaagaacaggttcaggaaaaagcactttactttttgcattt
ttaagactgctgaatacagaaggggatatccagattgatggagtctcctggaacacagtc
agcgtgcagcaatggagaaaagcatttggagtgattcctcagaaagtgttcatattttct
ggaagttttcggatgaatttggatccttatgggcaatggaacgatgaagaaatatggaaa
gttgcagaggaggttgggctgaagtctgtaatagagcaatttccaggcaagcttgatttt
gttcttgtggatggaggctgcgtcctcagtcatggccacaaacagctgatgtgccttgcc
cggtcagttctcagcaaagctaagatcttgctgctcgatgaaccaagtgctcacctggac
cctgtaacttcccaagtgatcaggaagaccctgaagcatgcgtttgccaactgcacggtg
atactctctgagcacaggctggaggcgatgctggaatgccagagatttttggtaattgag
gacaatagactgaggcagtacgagtccattcagaagctgctgaatgagaagagctccttc
aggcaggccatcagtcacgctgagcgccttaagctactgccagcacaccacagaaactcc
agcaaacgtaaaccccgaccccagatcactgccctgcaggaggagacagaggaagaagtg
caggagaccagactgtga
DBGET
integrated database retrieval system
