Taeniopygia guttata (zebra finch): 100222289
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Entry
100222289 CDS
T01082
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tgu03012
]
100222289 (DHX57)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100222289 (DHX57)
Translation factors [BR:
tgu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100222289 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
RWD
HA2_C
zf-CCCH_4
HA2_N
zf_CCCH_4
Torus
AAA_22
zf-CCCH
zf-CCCH_2
nSTAND3
UBA
AAA_19
NPHP3_N
NB-ARC
AAA_14
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
100222289
NCBI-ProteinID:
XP_030125174
Ensembl:
ENSTGUG00000002076
LinkDB
All DBs
Position
3:complement(111279867..111296973)
Genome browser
AA seq
1357 aa
AA seq
DB search
MSWLGRKKGKPNRGGGRGRGGSGRRGGSSGHSNKPQLGGSRKCSSKIWDDGDDFCLFEEP
RLESRSSAPARRGGQMKQRPEAKMPLQTIHMTSENQRRVKELLQELQGQELAPESDVAGE
DDDEPDYLDDEQCWSTEQEASDVMPRLSAEPAEHRIVDSEVSSFAVHKLSRYGFDCERCR
AVLRSCNGNIGASLEYLLLQCFSERYGEKMQISEAAAEASQEECLEQRQEEAFALRSIYG
EKFIERIKNRVWTFNLELGYLAHRFSKSKQKSTRDTAKQTSKEICKFYLQGGCRFGSKCR
FRHEFPPNHPLNTSKNSVDDAHLRCSDGPIYELEVRFPDENKYPLQAPLVAVYSTDENLP
LACRLHIAEFLFGKALAAAESHEPVVYTLVTCLEDEHEISELLSNTHHKFSVPPVSLLAA
PPVKPQTENAPASNQQAEASTVSEPQEEEVVAEEEEEEPEQVVVENESYVNLKKKLSKKY
DVQAKSLYNENVKICAQFRQKKSSRHFQSMLYERQKLPAWQERENILGLLESHQVLVVSG
MTGCGKTTQIPQFILDASLQGSPSRVANIICTQPRRISAISVAERVAKERTERIGLTVGY
QIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGVTHVIVDEVHERTEESDFLLLVLKDI
MVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTRYVLEDSS
PYRKKVKHEQSGRHKRTAFEEVEEDLRRAGLLETTDTVVRDSDPDQQLTLKQLLTRYKGV
SKSVLKTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGLAEIKMLYEQLQTN
ALFNNRHSKRCVVYPLHSSLSSEDQQSVFLRPPAGVTKIIISTNIAETSVTIDDVVYVID
SGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLFSSHHYNHQLVKQQ
LPEIQRVPLEQLCLRIKILEMFSEQSLHSVLSRLIEPPRTESLQASKVRLRDLGALTPEE
KLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKK
KLEFAVGNSDYLALLQAYKGWRLSIKEGSQASYNYCRENFLSGRVLQEIASLKRQFAELL
SDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANSNAENIKLISAMLCAALYPNVVQVK
KPEGKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKT
SRVFIRDCSMVSVYPLVLLGGGQVHMQLLKGDFVISLDDGWIRFVAASHQVAELVKELRC
ELDQLLQDKIKNPSMDLCMCPRGSRIIGMIVKLVTTQ
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttagggaggaaaaaaggaaagcccaacagaggaggaggacgagggagagga
ggcagtggaagacgaggaggcagcagtggccattcaaacaagcctcagcttggtggaagt
aggaaatgttcaagcaaaatttgggacgatggagatgatttttgtctctttgaggaacca
aggctagaatccagatcaagtgcccctgccagaagaggagggcaaatgaagcagagacct
gaagcaaaaatgcctctgcagaccatacacatgacatcagagaaccagagaagagtgaaa
gaactccttcaagagctgcaaggacaggagctggcacctgagtcggatgtagctggagaa
gatgatgatgagcctgattacctcgatgatgaacagtgctggtcaacagaacaggaagct
tctgatgtaatgccaaggttgtctgctgagccagctgagcacagaattgtagacagtgaa
gtgtcttcatttgctgtgcacaaactctccaggtatggttttgactgtgagcgttgtagg
gcagtgctgagatcctgcaatggtaatattggggcatcattggagtatttgctgttgcag
tgcttctctgaaaggtatggagagaagatgcagatttctgaagcagctgctgaagccagt
caagaggaatgtttagagcagaggcaagaagaagcttttgcccttcggtcaatttatgga
gaaaaatttatagaaaggattaaaaatcgtgtttggactttcaatttggaattgggctac
ctagcacacaggttcagtaaatctaaacaaaaaagtacgagggacacagcaaaacagact
tcaaaggaaatatgtaagttttacctccaaggaggctgcaggtttggttcaaaatgcaga
tttagacatgaattccccccaaaccatccactaaacacatccaagaactctgtagatgat
gctcacctcagatgtagtgatggtcccatatatgaacttgaagtaagatttcctgatgag
aacaagtatcctcttcaagcacctctcgtggcagtttactccactgatgagaatctgcct
cttgcttgtcgtctgcatattgctgaattcctctttggaaaggccttggcagctgcagaa
tctcatgagccagtggtgtacaccttggtgacttgcttagaagatgaacacgagatcagc
gagctcctgagcaatactcaccacaagttcagtgttcctcctgtctccctgctggcagca
cctcctgtaaagccacagacagagaatgcacctgcttcaaatcaacaagccgaagcctca
acagtgtcagagcctcaggaagaagaggtggtggcagaagaggaggaggaagagcctgaa
caagttgttgtggagaatgagagttatgtgaacttgaagaagaagctttccaaaaagtat
gatgtgcaggcaaagtctctgtataacgaaaatgttaaaatctgcgcacagtttcggcag
aaaaagtcttccaggcactttcagtccatgctgtatgaaagacagaagctccctgcatgg
caagagagggaaaacattttgggtttacttgaaagtcaccaagttcttgttgtgagcggc
atgacaggatgtgggaaaaccactcagattcctcagtttatcttggatgcttctttgcaa
ggctctccaagcagagttgcaaacatcatctgcactcagcctcgcaggatctctgccatt
tctgtagctgaacgtgtagccaaggaaagaacagaaaggattggactcactgttggatat
cagatccgtctggaaagtgtaaagtcctcagctaccagactcttgtactgcactactggt
gtactgttgagaaggctggaaggagatctgactttgcagggagtcactcatgttattgtt
gatgaagttcacgaaagaacagaagaaagtgacttcctgctgctggttttgaaggatata
atggttcagaggccagacctgcgcattatactgatgagtgccaccctgaatgctgagctt
ttctctcagtacttccactcctgtccaatcattaacataccaggtcgaacgtttcctgtg
gaccagttttttctggaagatgtgattgcaatgacaaggtatgttttagaggacagcagt
ccctacaggaagaaggtcaagcatgaacagagtgggagacacaaaagaactgcatttgaa
gaagtagaggaagacctgaggcgtgctggccttctggaaaccactgacactgtggtcaga
gattcagacccagaccagcaattaactctgaagcagctccttacacgatataaaggggtt
agcaagtcagtgttgaaaacaatgtctgtcatggacttggacaaagttaatctagaatta
attgaagccttgctggaatggatagttgctggcagacattcataccccccaggtgctgtg
ttgatatttttgcctggcctagcagaaatcaagatgctttatgagcagcttcagactaat
gctctttttaataacaggcacagcaagaggtgtgtggtttatccacttcattcctcactg
tccagtgaagaccagcagtctgtgttcctcaggcctcctgcaggagttaccaaaatcatc
atctccaccaacattgctgagacatccgtcaccatcgatgacgtggtctatgtgattgac
tctggaaaaatgaaagagaaaagatacgacccaagcaaaggaatggaaagtctggaggac
acctttgtgtccaaggccaatgctctgcaaaggaaagggcgggcaggacgtgtggcctca
ggcgtctgcttccatcttttcagcagccaccactacaaccatcagcttgtaaaacagcag
ctgccagaaatacagagagtgcccttggagcagctctgtctaagaattaagatcctggag
atgttttccgagcagagtcttcactctgtcttatcacgactgatcgagccccccaggact
gagtccttgcaggcatcaaaggtgcgactgcgggacctgggagcattaactccagaggag
aagctcactcctctgggataccacttggcttcgctgcctgtggatgtcaggattggcaag
ctcatgctgttcggcaccatcttccgctgcctggatcctgcactgaccatagcagccagc
ctggcctttaagtcaccttttgtgtcaccatgggataaaagggaagaagcaaacaaaaag
aagctggagtttgcagtaggaaacagtgactacctggctctgctccaggcctataaggga
tggcgtttaagtatcaaagagggctctcaagcaagctacaactactgcagagagaacttt
ctgtcaggaagagttcttcaggagattgccagtctgaagaggcagtttgcagagctgctt
tctgacattggctttgtgaaggaaggattgagagccagggatattgagaagaagtggtcc
caaggaggtgatggcgtgttggatgccacaggagaggaggcaaattcgaatgcagagaac
atcaagctgatctcagctatgctgtgtgctgcactgtatcccaatgttgtccaggtgaaa
aagccggagggtaaataccaaaagaccagtacaggagcagtcaaaatgcaaccaaaagca
gaagagctgaagtttgttactaaaaatgatggttatgttcatattcatccttcatctgtg
aattatcagaccaggcactttgagagcccgtacctggtgtaccacgagaagatcaagacg
agccgagtgttcatccgggactgcagcatggtgtccgtgtacccgctggtgctgctgggc
ggtggccaggtgcacatgcagctgctcaaaggggactttgtcatctccctggatgacggc
tggattcgctttgtggcagcctctcaccaggtggctgagctggtgaaggagctgcgctgc
gagctggaccagctgctgcaggataaaatcaagaatcccagcatggatttgtgcatgtgt
ccccgaggctctcggatcatcgggatgattgtcaagcttgtgaccacacagtga
DBGET
integrated database retrieval system
