Taeniopygia guttata (zebra finch): 100222391
Help
Entry
100222391 CDS
T01082
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100222391 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100222391 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100222391 (SHH)
Peptidases and inhibitors [BR:
tgu01002
]
Cysteine peptidases
Family C46: hedgehog family
100222391 (SHH)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Morphogens
100222391 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
100222391
NCBI-ProteinID:
XP_002190744
Ensembl:
ENSTGUG00000000697
UniProt:
H0YR00
LinkDB
All DBs
Position
2:complement(8061137..8070956)
Genome browser
AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVQLENGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRQPRARLLLTAAHLLFVAPQQNQSQAGAGSGRALFASRVR
PGQRVFVLGEGGRRLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHSW
AHWAFAPFRLLQAVLAALCPSAAGSPVAEPAAPGIHWYSRLLYRIGSWVLDGDSLHPLGM
MVSSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
cccggagtaaagctgcgggtaaccgagggctgggacgaggacggccaccactccgaggag
tctctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtttactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcggccaaatctgggggt
tgcttccctggctcggccacggtgcagctggagaacggtgggaccaagctggtgaaggac
ctgaggcctggagacagggtgctggtggccgacacggagggccgccttctctacagcgac
ttcctcaccttcctcgaccgcgaggacggctcccacaagctcttctacgtcattgagacg
cggcagccccgggcccggctgctgctgacggccgcccaccttctcttcgtggccccccag
cagaaccagtcccaggcaggggccggcagcggccgggcgctgttcgccagccgcgtgcgg
ccgggccagcgcgtcttcgtgctgggcgagggcgggcggcggctgctgccggcggccgtg
caccgcgtgtcgctgcgggaggaggcgtcgggcgcctacgcgccgctcaccgcccagggc
accatcctcatcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagctgg
gcgcactgggccttcgctcccttccgcctgctccaggccgtgctggccgccctctgtccc
tccgcggcggggtcccccgtggcagagcccgcggcccccggcatccactggtactctcgg
ctcctctaccgcatcggcagctgggtgctggatggggactctctgcacccgctgggcatg
atggtgtcatccagctga
DBGET
integrated database retrieval system
