Taeniopygia guttata (zebra finch): 100222570
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Entry
100222570 CDS
T01082
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100222570 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100222570 (EXOSC10)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100222570 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
100222570
NCBI-ProteinID:
XP_030145055
UniProt:
A0A674GXF3
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Position
21:4888294..4902519
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AA seq
897 aa
AA seq
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MAAAGGEGSPAGRAGSSGTPADTEGRSTMPALPGFDSPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYRSFPGFRAFCNTQSDRLLRCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDVILERVSILLDEASGVNRNQQPVLPAGLQPPQMIVSSWNRKAGEFHKRTQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDEVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLALRSDMNILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCGVDA
DKKYQLADWRIRPLPEEMIRYARDDTHYLLYIYDKVRELLWERGKEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLDLYRRQKKHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKEPQGIIACCNPVPPLVRQQINELHLLIQQAREMPLVKSETTLAVRKRAP
LPNPEKLENALFGPHDSSRIPMDHFQNNSALDPALVLEDVCLFSDSERTMDIQDSQPEST
CLVATTTVSIFSECDENEGNKRTLTTAQRKAQLIMESFENPFKMYLPPEENSAYVSQSAK
FDPSSKIYEISNRWKLMSQAPVQKSKNETNKKAAQQSAAPVQTQKVHKKAAENVVSVRQQ
AMQEQANRKRERGTSEVGAETGAELPMQEKKRQKKPQQPEELEARMQFTPFDYSKSNFKV
FAGGSKSKQSPQFDPAKQAYTGKKFAGANKLQQSGNRSMSYLVGKAERSSTHHWPKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccggcggtgaggggagcccggcggggcgggcgggcagctccgggacgccc
gcggacaccgagggaaggagcacgatgccggccttgcccgggttcgacagccccgacgcc
ttcgtcaagtatgctctcggcacagtggtggctgcaacaaaggcatctaacgggctgccc
cagcccggtgacgagtacgatttctaccgcagcttccctgggttccgcgcgttctgcaac
acgcagagcgaccgcctgctccgctgcatgagccaggtgatgcagtaccatggttgccgg
agcctcatgaaagattccagcaaagtgacagggctggaagataaatttgatatgctggtt
gactccaatgatgtcattcttgaaagagtgagtattttattggatgaagcatcaggagtg
aatagaaaccagcagccagtcctgccagctgggttacagcccccacaaatgattgtttcc
agctggaaccgtaaggcaggagaattccacaagagaactcagtctgaaacattccgactg
cttcatgccaagaatatttctcgaccacagcttaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaactttttatcaaaccaaatgctttgaagcctttgcctgaa
gccctcacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacgcagaaaactgagcaagacatgtttgct
cacccttaccagtatgagctggagcatttttcaccaccagatgaagttctcaagaaacct
gaactccagatgtacaggcccattgaggaaacaccctgtcattttatcaccacactggat
gagttggtggaactaaatgaaaagcttatgacttgcaaagaatttgccttggacttagag
caccactcctacaggagcttcctcggcttgacatgtctgatgcagatttccacccgaact
gaagatttcattattgatacattggcactgcgcagtgacatgaacatcctcaatgagacc
ttcacagaccctgcaattgtgaaggtccttcatggtgctgattcagatgtggaatggctg
caaagagactttggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaatcttggcagacattctttggatcacttgctaaagctgtattgcggtgtagatgct
gacaagaagtaccagctggctgactggagaatacgccctttgccagaagaaatgatccga
tatgcccgtgatgacactcactacttgctctacatctatgataaagtgagggagttgctg
tgggagagagggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagagac
atctgcctgaagaaatacatcaagcccctctttacagatgaatcctaccttgatctctac
aggaggcagaaaaaacaccttgatacccaacagctggcagcatttaggctgctgtttgca
tggagagacaagatagcacgacaagaggatgagagcacagggtatgtgctaccaaatcat
atgctgttgaagatcgcagaggagctgcccaaagaaccccagggtatcattgcttgctgt
aaccctgtcccaccacttgttcgccagcagattaatgaattgcatctgctcattcagcag
gcccgagagatgcctcttgtcaagtcagagactactttggcagtcagaaagagagcacct
ctacccaaccctgagaagctggagaatgcgctctttggaccacatgacagttcacggatt
cctatggatcattttcagaataactctgccttggaccctgcactagttttggaagatgtt
tgtctcttttcagacagtgagaggacaatggatattcaagacagtcagccagagtcaaca
tgtcttgttgctactaccactgtcagcatattcagtgaatgtgatgaaaacgaaggaaat
aagaggactttgaccactgcacagcggaaagctcagctaataatggagtcatttgaaaat
ccatttaaaatgtatctacctccagaggagaattctgcctatgtctcacaatctgcaaag
tttgacccatcatcaaaaatttatgaaatcagcaatcgatggaagttgatgagtcaggca
ccagtacagaagtccaagaatgaaaccaataagaaagcagcccagcagtcagctgcccct
gtccagacgcaaaaggtgcataaaaaggcagcagaaaacgttgtatctgttcgtcagcaa
gccatgcaggagcaagctaataggaagagggagagaggcacaagtgaagtgggagcagaa
acaggagcagagttgccaatgcaagaaaagaaacggcagaaaaagccccagcaaccagag
gagctggaagcacgaatgcagtttactccctttgattacagcaagtccaacttcaaagtg
tttgcaggaggcagcaaatcaaaacagtcaccacaatttgatcctgccaagcaagcttac
acaggcaagaaatttgctggagctaacaaacttcaacagtctggaaaccgaagcatgtcc
tacctggtggggaaagctgaaaggtcttcgacacaccactggccaaagagataa
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