Taeniopygia guttata (zebra finch): 100222588
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Entry
100222588 CDS
T01082
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100222588 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100222588 (RUNX1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
100222588 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
100222588
NCBI-ProteinID:
XP_030140349
UniProt:
H0Z2R6
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All DBs
Position
1:112769274..112955865
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AA seq
472 aa
AA seq
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MASNSIFESLPSYQHFLRDTSTSRRFTPPSTTLSPGKMSEPLALPGAEHGGALPGKMRAA
DRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMA
GNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIK
ITVDGPREPRRHRQKIDEQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLN
HSTAFNPQPQSQIQDTRQVQPSPPWSYDQSYQYLGSIAAPAVHPATPISPGRAGGMTSLT
AELSSRLSGASDLTAFSDPRVGIDRSFPALPSISDPRMHYPGAFTYTPTPVSSGIGIGMS
AMSTATRYHTYLPPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFSMISGGDRSPPRI
HPPCTNASTGSALLNPNLPNQSDVVEAEGSHSNSPTNMASTARLEEAVWRPY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacagcatatttgagtcacttccttcttaccagcacttcttgagagatacc
agcaccagccgccgcttcacgccgccctccaccacgctgagcccggggaagatgagcgag
ccgctggcgctgcccggtgccgagcacggaggggctttgccggggaagatgcgcgccgcg
gaccggagcatggtggaggtcctggcggatcatcccggggagctggtgcgcaccgacagc
cccaacttcctctgctccgtgctgcccacgcactggcgctgcaacaagacgctgcccatc
gccttcaaggtggtggccctgggggacgtccccgacgggaccctggtgacggtgatggcc
gggaatgacgagaattattcggcagagctgcgcaacgccacggccgccatgaagaaccag
gtggcgcgattcaacgacctgcgcttcgtgggcaggagcggcagagggaaaagcttcact
ctgactatcacagtcttcacaaaccctccccaagtggccacgtaccacagagccatcaag
atcacagtggatggacctcgggaaccccgaagacatcgtcagaaaatagatgagcagaca
aagcccggcagcttgtccttttctgagcgcctgagcgagctggagcagttgcgtcgcacg
gccatgagggtcagcccacaccacccagcccccacacccaaccctcgagcctccttgaac
cacagcacagcttttaaccctcagcctcagagtcagattcaggacacccggcaggtgcag
ccctcgccgccctggtcctacgaccagtcctaccagtacctgggctccatcgccgcgccc
gccgtgcacccggccacgcccatctcacctggccgggccggcggcatgacctcgctcacg
gccgagctctccagccgcctctcaggagcgtcggacctgacggcattcagcgacccccgg
gtgggcatcgaccgctccttcccggcgctgccgtccatctccgaccctcgcatgcactac
ccgggcgccttcacctacacgcccacgcccgtcagctccggcatcggcatcggcatgtcg
gccatgtccacggccacgcgctaccacacgtacctcccgccgccctaccccggctcctcc
caggctcagggcagccccttccagaccagctccccgtcctaccacctgtactacggcacc
tcggccggctcctaccagttctccatgatctccggcggcgaccgctcgccgccgcgcatc
cacccgccctgcaccaacgcctccacgggctccgcgctgctcaaccccaacctgcccaac
caaagcgacgtggtggaggccgaaggcagccacagcaactcgcccaccaacatggccagc
acggcgaggctggaggaggccgtgtggaggccgtactga
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