Taeniopygia guttata (zebra finch): 100222739
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Entry
100222739 CDS
T01082
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100222739 (RLIM)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100222739 (RLIM)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100222739 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100222739
NCBI-ProteinID:
XP_030128739
Ensembl:
ENSTGUG00000005799
LinkDB
All DBs
Position
4A:complement(16437211..16454476)
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AA seq
595 aa
AA seq
DB search
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDHSSASEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSPPETRPAPQA
AGSSETTGTSESTAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPSGPAPSQNVETSEPQSGGGGASGNENADVSSGEVYEGGHEASSTSGARR
EGRNMRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctagtgataaaggaagtattgatcaatcagaagcccaacgtcag
agccagctggatcggttagatcgagaagaagctttctatcagtttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacaacacgaagtgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccaaatagcggcgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcggaggagctgacagct
gaggaggcttcccctcctagagggcagaggagagccaggagtaggagtccagagcagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagcgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacttgaccactcctcagcgagcgaggct
gaaggtagctctagaaccaggcagcacgtgacgttaaggcagcacacagtggggactgag
gtgccaagtgaaaatgcagttctgttttccccccctgaaacgaggcctgctcctcaagca
gcaggttcttcagaaaccaccggcaccagtgagtccacggctcctgggcagaggcctccc
accatagtgcttgacctgcaggtgagaagagttcgcccgggcgagtaccggcagagggac
agcatagccaacaggacccgctcccggtcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcaccttctcccgctcggagcgggccggggtgagaact
tacgtcagcaccatcaggattcccatccgcaggatcttaaacaccggcctgagcgagacc
acctcggtcgccatccagaccatgctgaggcagatcatgacaggctttggggagctcagc
tacttcatgtacagcgatagcgatgcagatcccagtgggccagctcccagtcagaacgtg
gagacttctgagccgcagagcggcggcgggggcgcctcgggcaatgagaacgcagatgtt
agctcaggggaggtgtacgagggtgggcacgaggctagctcaacatctggtgccaggcgg
gaaggccggaatatgaggggatcggtcactttcgaagaaagtggttctctaccattcctt
agccttgcacaatttttcctactcaatgaagatgacgatgaccaaccaagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcacagagtacacggagggcaacaagctccgcaagctgccgtgctcg
cacgagtaccacgtgcactgcatcgaccgctggctgtcggagaactccacctgccctatc
tgccgcagggcagtcttagcttctgggaacagagagagcgttgtctga
DBGET
integrated database retrieval system
