Taeniopygia guttata (zebra finch): 100222770
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Entry
100222770 CDS
T01082
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100222770 (MSH4)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100222770 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
nSTAND_NTPase5
CTD
ATPase_2
AAA_28
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
100222770
NCBI-ProteinID:
XP_030132518
Ensembl:
ENSTGUG00000010473
LinkDB
All DBs
Position
6:34774927..34813932
Genome browser
AA seq
936 aa
AA seq
DB search
MAGAGGRAIASATSESYAGRGSSTPSVGGRAEQTPRYTLGLLQTPHSSESTGACSSGGIR
PGGSGGEGLVAGRVAGNSAVKPAASERGESYFGDKSSCVENANTLNLTSSSSLRGLNSAC
IGKTPLSSGRSGCRSHTPLMGYSVTSSSAVSAHTVASVIVAVVEGRGLARGEVGMASIDL
KNPEIILSQFADNTTYTKVITKLKILTPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFT
TVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKS
LKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRANILEP
LVDAETINTRLDSVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKI
TNLIYLKHTLELVEPLKAALRSCNTQLLKAYYNSLEDTRFGIILEKITSVINDDTRYTKG
CLSMRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYSLPMKTGFSSARGFF
IQMNADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCK
LLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIA
MEKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQ
IFTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAAC
EYLLNLKAFTLFATHFLELCHIDALYPNVENYHFQVQHVRSSAGNKEKIAYTYTLSKGYT
EEKNYGLKAAEVSSLPSSIILDAKEITSHIAKQILHRQKSTPEMMKQRATYQLAMRLVQT
ARNSRLDPDSLRVYLKALKKKYEASCATPRKNDEQQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgggcgggcgggccatcgcctcggccacctcggaatcctacgcgggccgc
ggctcttccacgccgagcgtgggcgggcgggcggagcagacaccccgctacaccctggga
ctgctgcagacgccgcacagctcggagagcaccggggcctgctctagcggcgggatacgg
ccgggcggctccggcggggaaggcctcgtagccggccgggtcgccgggaacagcgcggtg
aagccggcagcttccgaaaggggagaatcatattttggggacaaaagttcttgtgtagaa
aatgctaacacattgaatctcacgagttcttcttctctgcgaggcctgaatagcgcatgt
ataggaaaaacacctctctcttctggtagatctggttgcagaagccatacccctcttatg
ggatattcggttacatcctcatctgcagtttctgctcatactgttgcatcggttattgta
gctgtagtagaaggaagaggccttgccagaggggaagtaggaatggccagtatagattta
aaaaatcctgagataatattatcacaatttgcagacaatacaacttacaccaaggttatt
actaaactcaagattttaacaccactagaaataataatgtcaaacactgcctgtgatgca
gggaatacaacaaaattattcagtctgataacagagcatttcaagaatgtgacgtttaca
actgtccagagaaaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgt
gcatctgaattcagcaccattttcatggaagtccaatcaaagtattactgtcttgcagct
gcagcagctttgctaaaatatgttgaatttatccaaaacgccgtttatgctcctaaatcc
ctcaaggttcgtttccaggggagtgagaaaacagctatgatagattcatcatcagcacaa
aatcttgaactagtgattaataacagagattctcggaatggtcatacacttcttggtgtt
ctaaattacactaaaactcccggtggaagtcggagacttagagccaatattctggaacct
ctagttgatgctgaaacaattaacacaagactggactctgttcaggaattactccaggat
gaggaactcttttttggtcttcaagcagttatctcaaaattcctcgatacagaacaacta
ctttcagttttggtacagattccaaagcaggatacagttaaaactgctgaatccaaaata
actaatttaatctacctgaagcataccttagaacttgtggagcctctgaaagctgcttta
agaagctgtaacacacagctgctaaaggcttactacaattctcttgaagatacaagattt
ggaattatacttgaaaagattacaagtgtaattaatgatgatacaagatacacaaaagga
tgtctgagtatgaggactcagaagtgctacgctgttaagcctaacatcaatgaattcctt
gacatagctcgtagaacatacacagaaattgttgatgacatagcaggtatgataacgcaa
cttgctgaaaagtacagcctgccaatgaaaaccggtttcagctctgctcgtggatttttt
atccagatgaatgctgattgttcaacattacctaatggccagcttccttcagagtttaca
aagatcacgaaaatgaagaacacatatagcttcacttcagcagatttaataaaaatgaac
gaaagatgtcaggagtccctgagagaaatatatcacatgacttacttaatagtgtgtaag
ctactgaatgagatctatgagcacattcattgcttatacaagctgtctgacattgtgtct
atgctggatatgctgctttcatttgcccacgcctgcactctttccgattatgttcgtcca
gaatttaccgatactttagcaatcaagcagggatggcatcccattcttgaaaagatagct
atggaaaagcctgtgtctaacaacacgtacctgacagagggcaacaattttgtcattatt
acaggaccaaatatgagtggaaaatcaacgtacctgaaacagattgctctctgtcaaatt
atggcacagattggttcttatgtcccagcagagtattgttcttttcgaatcgcagagcag
atttttaccagaataggaatggatgatgatattgaaacaaatgcatcaacattcatgaag
gaaatgaaagagataacgtacatcatacagaatgctaatgataaatcactcattattatt
gatgaacttggcagaggtaccagtgccgaagaaggtattggaatttgttatgctgcctgt
gaatatctgttgaacttaaaggcatttacactgtttgctacacatttcctggaactatgt
catatagacgctttatatcccaatgtggaaaactaccattttcaagtgcaacatgtgaga
agcagtgctggaaataaggagaaaattgcttacacttacacactttctaaaggatacaca
gaggaaaagaactacggactaaaagctgcagaagtgtcctccctaccatcatccataatt
ttggatgcaaaggaaatcacaagtcacattgcaaaacaaattttgcacaggcagaagagc
actcctgagatgatgaaacagagagctacataccagttagcaatgagattggttcagact
gccagaaattctcgactggaccctgacagtttgcgtgtatatttgaaagccctgaagaaa
aagtatgaagccagttgtgccacacccagaaaaaatgacgagcaacagtaa
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