Taeniopygia guttata (zebra finch): 100222788
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Entry
100222788 CDS
T01082
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04115
p53 signaling pathway
tgu04120
Ubiquitin mediated proteolysis
tgu04137
Mitophagy - animal
tgu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100222788 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100222788 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100222788 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
100222788 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100222788 (SIAH1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100222788 (SIAH1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100222788 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
100222788
NCBI-ProteinID:
XP_002197771
UniProt:
H0ZEA6
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All DBs
Position
11:complement(7624928..7645790)
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AA seq
313 aa
AA seq
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MTGRSASSGPYSWKGVWSACLPGSKTCKGKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcagatctgcctccagcgggccgtactcctggaagggcgtctggtctgcgtgc
ttgccggggagtaaaacctgcaaggggaaagaaatgagccgtcagaccgccacagcattg
cccacaggtacctccaagtgcacgccgtcgcagagggtgcccgcgctgacgggcaccacc
gcttccaacaatgacttggccagtctctttgagtgtcccgtgtgctttgactatgtgctg
ccacccatcctgcagtgtcagagtggccatctggtctgtagcaactgtcgccccaaactc
acgtgctgccccacttgccgaggcccgctgggctccatccgtaacctggctatggagaaa
gttgccaattccgtactattcccatgtaaatacgcctcttccggctgcgagataaccttg
ccgcacacagaaaaagcagaccacgaggagctgtgtgagttcaggccttactcctgtccc
tgtcccggtgcttcgtgcaaatggcaaggttctctggatgctgtgatgccgcacctgatg
catcagcataagtcaattacaacgctgcagggagaagatatagtgttcctggccacggac
attaatcttcctggtgctgttgactgggttatgatgcagtcttgttttggctttcatttc
atgctagtgttggagaaacaggaaaagtatgatggtcaccagcagttctttgcaattgta
cagctgataggaacacgcaagcaagcagaaaactttgcttatcgactcgagctaaacggg
cataggcggcgattgacttgggaagcaactcctcgatccattcatgagggaattgcaaca
gccattatgaatagtgactgcctagtctttgacaccagcattgcacagctctttgcagaa
aatggcaatttaggcatcaatgtaactatatccatgtgttga
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