Taeniopygia guttata (zebra finch): 100222793
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Entry
100222793 CDS
T01082
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100222793 (HPS1)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
100222793 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
DUF2535
Motif
Other DBs
NCBI-GeneID:
100222793
NCBI-ProteinID:
XP_030132067
Ensembl:
ENSTGUG00000009485
LinkDB
All DBs
Position
6:20962276..20967060
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AA seq
700 aa
AA seq
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MRCVLIASTAAELLFYWADAAFLRRLRPSHAGQGPALEDSLNTLFAPLIISCAALLEKLS
DTYTCFATEGGRHLHVLHMFGDCLYIAVNGDGTQSEDDLRRTLFVLRRLVEAHCGLVTLD
SHLIRKELRPADSEQRERVWSLLRGLLDTYSHLREEDQSFAVEAVERLIHPQLCEQCIEF
LERQVVQYINASPERGGDEVGHAFLLVHTKLLAFYSSRNASSIRPADLLVLILLVQDLYP
SQSAEEELGPQATAGNVLPQGPKRSESIPVSGPGSHGAAEKDSDDQDTDDLSVPEVYYTP
EPSPGGHSTGSESWSEGAEMLSLGEVDTADVQMAEDLLQTLGPLVPEASNPRRIFLDASL
REGYCPLLPHTMHCLPLWPGISLVLLTKGPMTQVAITLYQLLDGFLVLEKKLEEGPEVGV
TRSYPFLAELRQRMDKFVKKLSGQDIQLQNTWLDFKNKIFSRSEPGSSLELLQSVANVKR
QLCSVYRQLFLTSAGHSLSQGLRDRAQKLMREKLLDWRDFLLVKSRRNITMVSYLEDFPG
LVHFIYVDRTAGQMMAPSLSVTEKSSSELGKGPLATFIKKKVWSLITLARRYLQKGYTTL
VLQDGDYCCSFFLWFENEMGYKLEVMEIPVLSDDSAPIGMLAGDYYRKLLRYYSKNHQAE
VVKCYELLTVHLGIIPSELVVQQAYDLARRLWEPSRIPLL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcgtcctgatcgccagcactgcggccgagctgctcttctactgggccgatgcc
gccttcctccgccggctgcggccgtcccacgccgggcagggcccggcgctggaggacagc
ctcaacaccctcttcgcccccctcatcatctcctgcgccgcgctgctggagaagctctcc
gacacctatacctgcttcgccaccgagggcgggcgccacctccacgtcctgcacatgttc
ggggactgcctgtacatcgcagtgaacggcgacgggacgcagagcgaggacgacctgcgc
cggacgctgttcgtgctgcggcgcttggtggaggctcactgtggcctcgtcacgctcgac
tcgcacctcatccgcaaggagctgcggccggctgattcagagcagcgggagcgtgtgtgg
agcctgctgcggggcctgctggacacctacagccacctgcgggaggaggaccagagcttt
gcagtggaggccgtggagcggctgatccatcctcagctgtgtgagcagtgcatcgagttc
ctggagcgacaagtggtacagtacatcaacgccagccctgagcgtggcggggatgaagtg
ggccatgccttcctcctggtacacaccaagctgctggccttctactccagccgcaacgcc
agctccatccgtcctgccgacctgcttgtcctcatcctcctggttcaggacctgtacccc
agtcagagtgctgaggaggagcttggcccacaggccacagcagggaatgttcttcctcag
ggacccaagagaagtgagagcattcctgtgagtggccctggctcccatggagctgcagag
aaggactcggatgaccaagacacagatgatctctctgtgcctgaggtgtactacacacct
gagccctcgccaggcgggcacagtacaggcagtgagagctggtcagagggtgctgagatg
ctgagcctcggggaggtggatactgcagatgtccagatggcagaggacttgctccagacc
ttggggcctctggtccctgaagcttcaaaccccagaaggatctttctggatgccagcctg
cgggaaggttactgccccttgctgccacacaccatgcactgcctcccgctctggccaggc
atctcccttgtgctactgaccaagggccccatgacccaggtggccatcaccttgtaccaa
ctgctggatggtttcttggtgctggagaagaagctggaagagggaccagaggtgggagtc
acacgctcctacccattcctcgctgagctgcggcagcgcatggacaaatttgtaaagaag
ttgagtggacaggacatccagttgcagaacacctggttggacttcaagaacaagatcttt
tcacggagtgagcctgggagctccctagagctgctacagtcagtggccaatgtgaagcgg
cagctctgctccgtgtaccgccagctcttcctgacctctgctggccacagcctgtcccaa
gggctgcgggaccgtgctcagaaattgatgagggagaagctgctggactggcgggacttc
ctgctggtgaagagcaggcgcaatatcaccatggtgtcatacctggaggacttccctggt
ctggtgcacttcatctatgtggaccgcacagctggacaaatgatggcaccatcactcagt
gtgacagagaaatccagttcagagctgggcaagggtcccctggctactttcatcaagaaa
aaggtctggtccctgatcacactggcccggcgatacctacagaagggctatacaacactg
gtgctgcaggatggcgactactgctgctcctttttcctctggtttgagaatgagatgggc
tacaagctggaggtgatggagataccagtcctttctgatgattctgctcccattgggatg
cttgccggggactactacaggaagttgctgcgttattacagcaagaaccaccaggcagag
gtagtgaagtgctatgagctgctgactgtgcacctgggcatcatcccctccgagctcgtg
gtccagcaggcctacgacttggcccggcgcctctgggagccatcccgaatccctctgctc
tga
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