Taeniopygia guttata (zebra finch): 100222815
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Entry
100222815 CDS
T01082
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100222815 (MSX1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100222815 (MSX1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
100222815
NCBI-ProteinID:
XP_002196215
Ensembl:
ENSTGUG00000009947
UniProt:
H0ZI43
LinkDB
All DBs
Position
4:complement(12625222..12628180)
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AA seq
291 aa
AA seq
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MAPAVDMTAAPTGVRSDELPASAFSSPGGGALPVAAAMGGEEESDKPKVSPSLLPFSVEA
LMADHRKPGGRDGPEGAGPPPGAGAASLSPRLGALSAEAPPSPLPLGGHFAVGGLVKLPE
DTHVKAESPEKQERSPWMQTPRFSPPPPRRLSPPACTLRKHKTNRKPRTPFTTAQLLALE
RKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPP
AAFGISFPLGGPAVAGASLYGASSPFQRAGLPVAPVGLYTAHVGYSMYHLT
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgtggatatgaccgccgcgcccaccggggtccgcagcgacgagctgccc
gcatccgccttcagcagtcccggcggcggcgcgctgcccgtcgcggcggcgatgggcggg
gaggaggaaagcgacaagcccaaggtttccccgtccctcctgccgttcagcgtggaggcg
ctcatggccgaccacaggaagccgggaggcagggacggacccgagggcgccgggcccccg
ccgggcgctggggcggccagcctcagcccccgcctgggcgcgctgtcggcggaggcgccg
ccgtccccgctgcccctcggcgggcacttcgccgtcggggggctggtcaagctgcccgag
gacacgcacgtcaaggcggaaagccccgagaagcaggagcgcagtccctggatgcaaacc
ccacgcttctcgccgcctcccccgaggcgactgagcccgcccgcctgcaccctgcgcaag
cacaagacaaacaggaagccccggacgcccttcaccacggcacagctgctggccctcgag
aggaagtttcggcagaagcagtacctgtccattgccgagcgtgccgagttctccagctcg
ctcagcctcacggagacccaggtgaagatctggttccagaaccgtcgcgccaaggccaag
cggctccaggaggccgaactggagaagctgaagatggcagccaagcccatgctcccgcct
gctgcttttggcatctccttcccattgggcggcccggccgtggctggcgcttctctgtac
ggcgcctccagcccttttcagcgggcagggctgcccgtggctcctgtgggactatacaca
gcacatgtgggatacagcatgtaccacctcacatag
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