Taeniopygia guttata (zebra finch): 100222835
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Entry
100222835 CDS
T01082
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
tgu
Taeniopygia guttata (zebra finch)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
100222835
NCBI-ProteinID:
XP_030146091
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All DBs
Position
23:5630930..5713472
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AA seq
1189 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPTMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGAF
GPRDAESDENDKGDKKSKGTFDGDKLGDLKEEGDVMDKSNGLPVQNGIDADVKDFSRTPG
NCQNSASEVDLLGPSQNGSEGLAQLASTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAA
AAAAATNSASQQSTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTSNLASSSFYGNSSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSTTGSGSRRDSLTGSTDLYKR
TSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcgtgcgttttgaagagaaaagcagttctgtggcaggactcgttcagcccc
cacctgaagcagcacgctcaagacacagccaaccccaccatgcctgtggtactgacatct
ggcacaggctcgcaggctcagccacagccagctgcaaaccaggcccttgcagcagggaca
cactccagccccgtgcccggatccataggagtggcggggcgctcccaggacgacgccatg
gtggattatttcttccagaggcagcacggggagcagctcgggggaggaggcagcggcggc
ggtggctacaacaacagcaaacaccgctggcctactggggacaacatccatgcagagcat
caggtgcgttccatggatgagctgaatcatgatttccaagcactggctctggagggacgg
gctatgggagagcagctgttgccgggtaaaaagttttgggaatctgatgattccagcaaa
gatggaccaaaagggatatttctgggagatcagtggagagacagtgcttggggaacatca
gatcactctgtttcccagccaattatggttcagagaaggcctgggcagggcttccatgtg
aacagtgaagtcaactcagtgctgtcaccacggtcagagagtggagggctgggagtgagc
atggtggagtatgtgctgagctcatctcctggagactcctgcctaaggaaaggagcattt
gggccaagggatgcagagagtgatgagaatgacaaaggggataagaaaagcaagggcacg
tttgatggagataaattgggagatctgaaggaggagggggatgtgatggataaatccaat
ggtttgcctgttcagaacgggatcgacgccgatgtcaaagacttcagccgcacgcccggg
aactgccagaactcggcgagcgaggtggatctgctgggccccagccagaacggctccgag
gggctggctcagctggccagcaccaacggggccaagcccgtggaggacttctccaacatg
gaatcccagagcgtgcccctggaccccatggagcacgtgggcatggagccgctgcagttc
gattattccggcactcaggtccccgtggactcggctgcggccaccgtggggctgtttgac
tacaattcccagcagcagctgttccagaggcccaacgcactggcagtgcagcagctgaca
gcagcccagcagcagcagtacgccctggctgctgcccaccagccacacatagcaggtcta
gctcctgctgccttcgttcccaacccctacatcatcagcgcggcgcctccggggacggat
ccctacgcggccgggctggcggcagctgccacgttaggtccagctgtggtccctcaccag
tactatggagtcacgccctggggagtttatcctgccagcctcttccagcagcaggcggcc
gccgccgccgccgccaccaactccgccagccagcaaagcacgcagcagacacagcagggc
cagcagcaggtgctccgtggaggggccagccagcgtcccctgactcccaaccagaaccag
cagggccagcagaccgatcctctggtggccgccgctgccgtcaactccgcgctggccttc
ggccaggggctggcagcgggaatgccagggtacccagtgctggctcctgctgcctattac
gaccaaacaggagccctggtggtcaacgccggggccaggaatggcctgggggctcctgtg
cgcctggtggcccctgcccctgtcatcatcagctcctctgcagcccaggcagccgtggca
gcggccgcggcgtcggccaacggagcggcaggagggctggcagggaccaccaacggcccc
ttccgacccctgggcacgcagcagccccagccccagccccagcagcagcccaccagcaac
ctggcctccagctccttctacggcaacagctccctgagcagcaactcgcagagcagctcg
ctcttctcgcagggctctgcccagcccgccaacacctcgctgggcttcggcagcagcagc
tccctgggagccacgctgggctcggcgctgggcggcttcggcaccgcagtggccaactcc
accacgggcagcggctcgcgccgggactcgctgacgggcagcactgacctgtacaagagg
acctcgagcagcctgacccccatcgggcacagcttctacaacggcctgggcttctcctcc
tcgcccgggcccgtgggcatgcccctgcccagccaaggccccggccactcgcagacacct
cctccttccctgtcctcacacggatcctcctccagcctcaacctgggggggctgacgaac
ggcagcggccgctacatctcggcggcgccgggggcggaggccaagtaccgcagcgccagc
agcgcctccagcctgttcagccccagcagcacgctgttcccgtcctcccgcctgcgctac
ggcatgtccgacgtgatgccctcgggccgcagccgcctgctcgaggacttccgcaacaac
cgctaccccaacctgcagctgcgcgagatcgcgggccacatcatggagttctcccaggat
cagcacggatccagatttattcagctgaaactggagcgtgccaccccagcagagcgtcag
ctggtgttcaacgagatcctgcaggcagcctatcagctcatggtggatgtgtttgggaac
tacgtcattcagaagttctttgagtttggcagcctggagcagaagctggcgctggcagag
cgcatccgtgggcacgtgctgtcgctggccctgcagatgtacggctgcagggtgatccag
aaggccctggagttcatcccccccgaccagcaggtaattaacgagatggttcgggagctg
gacgggcacgtgctcaagtgcgtcaaggaccagaacgggaaccacgtggtgcagaaatgc
atcgagtgtgtgcagcctcagtccctgcagttcatcatcgatgccttcaagggacaggtg
ttcgctttgtccacgcacccctacggctgccgggtgatccagaggatcctggagcactgc
ctgcccgagcagaccctgcccatcctggaggagctccaccagcacacggagcagctggtg
caggatcagtatgggaattacgttatccagcacgtcctggagcacggccggcccgaggat
aagagcaagatcgtagcagaaatcagaggcaacgtgcttgtgttgagtcaacataaattt
gccagcaatgtggtggagaagtgtgtgacgcacgcgtcgcgcacggagcgggccatgctc
atcgacgaggtgtgcaccatgaacgacggcccccacagtgccttatacaccatgatgaag
gatcagtacgccaactacgtggtgcagaagatgatcgacgtggccgagccggcccagagg
aagatcgtcatgcacaagatccggccgcacatcgccacgctgcgcaagtacacctacggc
aagcacatcctggccaagctggagaagtactacatgaagaacggggtggacttggggccc
atctgcggcccccccaacggcatcatctga
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