Taeniopygia guttata (zebra finch): 100222839
Help
Entry
100222839 CDS
T01082
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X2
KO
K24223
cilia- and flagella-associated protein 43
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100222839 (CFAP43)
Cilium and associated proteins [BR:
tgu03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
100222839 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
WD40_CDC20-Fz
CFAP43_N
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
100222839
NCBI-ProteinID:
XP_030132217
UniProt:
H0ZJJ0
LinkDB
All DBs
Position
6:complement(23297485..23340176)
Genome browser
AA seq
1656 aa
AA seq
DB search
MAAGPGPAGAALDVSWVQGFSNKNLAFVSNQTVCYPCGNYILFLDIKTKKTRAVQCQAGQ
VGAFAANANSQVVAFSDRKLNPLIHIYTFPELRKLTELKGDAQLDYTLLAFSFKGPYLAS
YSSVPEFVLSVWNWQENLLLCSESQPGLTGTALSFNPMNWQQLCFVAESSVTIWRIERSK
DEHHLTRHPVELPDDHGAMSPHEDLFFPASRNDDPYYGPDLPVSAIAGLKGHEAETFVPR
NCIKTSVHPTAHCWTATSEIYMGCEEGYVLAINAEQYSVSVLQQKAPPEFMQKIADVVSH
VRREVQKKKGGKPSSLQKPVLLAMAFCNEGLYAAGSEGILMFCHIKDLQYEIKICADISQ
PISSLLFSPDYTSLLLVTDQGTVYSYRPAHSGEAVKLLDTSSSCFLAADFLTPGNNYCVS
VTISGEVQVWSLEDGTFLSKLNLGIEATSMACCPSSNSVAVGTQTGQICFLDVTKAEAPR
VVHRTFLSKLPVLSLHYDQSGQFLIARAIEGHIFILDARPSKFFQVLGYIVLADEVLHLS
VISDLKYDSVEVMVLLNVAEVQQARLEIFHLSSAMIQDNDKYVNEQGMFNANDLKKEQYD
LDYPLSSAVRLKSHNIVYGYCTCAPFICKYYLSAKNKWDGPSVFSAEKKIPSKQFGSGLL
CLSPNSQWLAAAAKDGVLFIYNTSTLDIIAQKHCHSYQGGGIRSMVFSLDGNFILVNGEN
DCALVCLKWKEIKETEIEEAALYWQSLRDILNKSASDENSVLKSMAEWKFDPECTSKSPP
VTEEDGNVTNTDDMTWIGQKIQKVMREETQRFANQKEELQMGIKKLRETIQKMMHENEQV
PDTEKLEHSEFNLDLKEQEQVQAAAEEDVARARRELEMEILYHCYLQDLIKYKCWDDLCV
KERAVKCFHMDCEVRNYPLKERSKEELETLKKVLRLKQAETADLQAQKKNLDSEMALSEE
EREEAAEVTVDGASLCLNGSLSSQYGGDTSILYHQCDLHTKEQKLNQTILLKDVIYKVKT
AFNEEFDIVVQKKLQEIARVKERNLKIQEILEQLELQVELWEPVLTDDEMPERALTVQDS
EIKSEKYMTQEEKEQAELLAKLEMERRLAATDDERLRALDDMMGGVLEIRREDVLKLDIP
PPDFISRPEDLWTEEETKVFEEYEKKVNELNEEKEEYRQFLRNEWNKLEASIKETTQNFD
DIVCKLSEKKLKSQMVIYQEELKIVNLIYALLLDEELDTREAGLHKFLMKKKKEKVKGAR
KILTTKSGVEAYRGPYTDALQEEKSLEHGFMKQFAHIPGNLFEELLQLYKHRPETSRTET
LLDTANPYVKGSPEDYQDALFHLMKAMDELDSPEHMPSGLDQSLWKHFCLARRNKMESEE
LVKWKALALAEMQACLQRRTDENDKMKSELESTFQELIWLKEEKMKLQQNLTVQFLLKQG
QVELGSTQIPEYSDAILIDRRVVEELNCALAAQGEKKITAMVEFKDFSKGIIQLEWEHKK
MKMQIQDLKEKARDIVILPISKDCQLFLTVQNYETHIAQHLAGMEQSLGVMDKLHKKNVK
NHQKKVRELKKCIHLKEQANYELSLQLKEMLVSVSERMHIFEAADTRDISEKITRQRYQE
ILKQKHLRNLIREQEKQLAILQSRIESCNPRTLHII
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggccgggcccggcgggagccgccctggacgtgagttgggttcaggggttc
tccaacaaaaacttggcctttgtcagcaatcagactgtctgctacccttgtggtaattac
atcctcttcctggacatcaaaacgaagaagacaagagcagtgcagtgtcaggctggccag
gtgggagcctttgcagcaaatgccaacagccaagtggtggctttttctgaccggaagctg
aatcccctcatacacatctacacttttccagaactgagaaaactgacagaattaaaaggt
gatgctcagctggactataccttacttgcatttagttttaaaggcccatatctggccagt
tactcttcagtcccggagtttgttctttcagtatggaactggcaagaaaatctcctcctg
tgcagcgagtctcagccagggctaacaggaaccgctctgagttttaaccccatgaattgg
cagcagctgtgttttgttgctgagagctctgttaccatctggcgcattgaaaggagcaag
gacgagcatcaccttacacgacaccctgtggaactccctgatgatcacggggccatgagt
cctcatgaggatttgtttttcccagcttctcgtaatgatgatccatattatggtcctgat
ttgccagtttcagccattgctggactgaaaggacatgaagcagaaacatttgtgcctaga
aactgtattaagacctcagtgcatcccactgcccactgctggactgcaacctcagaaata
tacatgggctgtgaagaaggatatgttttggcaattaatgctgagcaatacagtgtttct
gttcttcagcaaaaagctccacctgagttcatgcagaaaatagcagatgtggtgtcccat
gttcgtagagaagtgcagaaaaagaaaggtggcaaaccaagcagtttgcaaaaaccagtt
ttacttgccatggcattttgtaatgagggactgtatgcagctggaagtgagggcatatta
atgttttgtcacatcaaagatctgcagtacgagataaaaatctgtgctgatatctcacag
cccatatccagcctcttattttctcctgattataccagtctgctgcttgtcactgaccag
gggacagtctatagttatagacctgcccatagtggagaagctgtcaaactcttggacaca
tccagcagttgttttctggcagctgattttcttactccagggaacaactactgtgtgtct
gtaacaatttcaggtgaagtacaagtttggtccttggaagatggaactttcctcagcaag
ttaaaccttggtattgaggcaacttctatggcttgctgtccctcctccaacagtgttgct
gtagggactcaaacaggtcaaatctgtttccttgatgttaccaaagctgaagctccacgg
gttgttcacagaacttttctttccaaacttccagtgctgtctttgcattatgatcagagt
ggccagttcctcattgcaagagctatagaaggacacatctttattctagatgctcgtcca
tcaaaatttttccaggttctgggatatatagtactggcagatgaagtgctccatctttct
gtaatttctgacttaaagtatgactcagttgaagtgatggtacttcttaatgtagcagag
gtccaacaagcaagactggaaatttttcatctgtcttcagcaatgatacaagataatgat
aagtatgtgaatgaacaaggaatgtttaatgctaatgacctgaaaaaggagcagtatgat
ctggattaccctttgagctcagcagtcagattgaagtcacataacattgtgtatggctac
tgcacctgtgcacctttcatctgcaaatactacctctctgcaaagaataagtgggacggt
ccatcagtattttcagcagaaaagaagattcctagcaaacagtttggatcaggtttgctc
tgtttatcacccaacagccagtggctggcagcagcagccaaggatggtgttttgtttatc
tacaatacttctactctggatataattgctcaaaagcattgccactcatatcaaggaggg
ggaatcagatccatggtattctccctggatggcaatttcatcctagttaacggtgaaaat
gattgtgccctggtgtgtctgaagtggaaggagataaaggaaactgaaattgaggaagct
gctctttactggcaatctctacgtgatatactgaacaagtctgcttcagatgaaaactct
gttttaaaatctatggcagaatggaagtttgacccagaatgcacatcaaaatcacctcca
gtgacagaagaagatggaaacgtcacaaatactgatgacatgacatggataggccagaaa
atacagaaggttatgagagaagagactcagaggtttgctaaccagaaggaagagctgcaa
atgggaattaaaaagctgcgtgaaactattcagaaaatgatgcatgaaaatgagcaggtg
ccagacactgagaaactcgagcactcggagttcaacctggatttaaaagaacaggaacaa
gtgcaagcagcggctgaagaagatgtggccagggcgaggagggagcttgagatggagatt
ttataccactgctatttgcaggatttaattaaatataagtgctgggatgacttgtgtgta
aaagaacgtgcagttaagtgcttccacatggattgtgaagtgaggaattacccactgaag
gaacgcagtaaagaagagctggaaactttgaagaaagttctccggttaaagcaggctgag
acagctgatcttcaggctcagaagaaaaatcttgactctgagatggctttatctgaggaa
gaaagagaggaggcagcagaagtgactgttgatggtgcatctctctgcctaaatggaagc
ctgagctctcagtatggtggggacacatctatcctataccaccaatgtgacttgcacaca
aaggagcagaaactcaatcagacaatattattgaaggatgtcatttacaaagtgaaaact
gctttcaatgaagaatttgacatagtagtacaaaaaaagttgcaggagatagcacgagtg
aaagaaagaaacctgaagatccaagaaatcttggaacagcttgaacttcaggtggaattg
tgggagccagtccttacagatgatgagatgccggagcgagcgctcaccgttcaggattca
gagattaaatctgagaaatacatgactcaagaggagaaagagcaggcagaattgctggct
aagcttgaaatggaaagacgccttgctgctacggacgatgaaagactgcgcgctcttgat
gacatgatgggtggagtgctggaaatcaggagggaagacgttttgaaactggatattcct
cctcctgattttatatccagacctgaggatctttggactgaagaagaaactaaagtattt
gaagaatatgagaaaaaagtcaatgaactgaatgaagaaaaagaagagtatagacagttt
ctgagaaatgaatggaacaaacttgaagcttccatcaaggaaacaacacaaaattttgat
gatattgtctgcaaactctctgaaaagaaactgaaatcacagatggtcatctaccaggag
gaactcaaaatagtcaatctcatttatgctttactgttggatgaagagttggacaccaga
gaagctggacttcataaattccttatgaaaaagaagaaagaaaaagtcaagggtgcaagg
aaaatcctgactacaaaatctggtgttgaggcttacagaggcccctatacagatgcatta
caggaagagaagagcctggaacatggttttatgaagcagtttgctcatatacctggcaat
ctctttgaggagcttttacaactttacaaacaccgaccagagacctcaaggacagaaacc
ctccttgacacagctaacccctatgtgaagggatcacctgaggattaccaagatgcactg
ttccatttaatgaaagccatggatgaactggatagtcctgagcacatgcctagtggctta
gaccagtctctatggaaacatttttgtctagctagacgaaataaaatggagagtgaggag
ctggtgaaatggaaggccctagcactggcagagatgcaggcctgtctccagagaagaacg
gatgaaaatgacaagatgaagtcagaattagagagcactttccaagaactcatttggctg
aaggaggagaagatgaagcttcagcagaatttgactgtccagtttttgctgaaacaagga
caggtggaattgggaagtactcagatcccagagtacagtgatgctattctcattgatagg
agggttgttgaagaactgaattgtgctcttgcggctcaaggagaaaaaaaaattactgcc
atggtagaatttaaagatttctctaaagggataatacagctggaatgggaacacaagaaa
atgaagatgcagatacaagatctgaaagagaaggctcgagatattgtaatcctacctatt
tcaaaagattgccagctattcctaactgtacagaactatgaaacccatattgctcagcat
ctagcagggatggagcagagccttggtgtcatggataagttgcacaagaagaatgtgaaa
aaccatcagaaaaaagtcagagagctgaagaagtgcatccatctaaaagagcaagcgaac
tatgagctcagcctgcagctgaaagaaatgcttgtctctgtgtcagaaaggatgcacatc
ttcgaggcagctgacacacgggatatttctgaaaagatcacaaggcagcgttaccaagag
atattgaagcagaaacacctacggaaccttataagggaacaggaaaaacagcttgcaatt
cttcagtcaagaattgaaagttgtaatccaagaacactccatattatttaa
DBGET
integrated database retrieval system
