Taeniopygia guttata (zebra finch): 100222912
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Entry
100222912 CDS
T01082
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03030
DNA replication
tgu03410
Base excision repair
tgu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100222912 (FEN1)
03410 Base excision repair
100222912 (FEN1)
03450 Non-homologous end-joining
100222912 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgu03032
]
100222912 (FEN1)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100222912 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100222912 (FEN1)
DNA replication proteins [BR:
tgu03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
100222912 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
100222912 (FEN1)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
100222912 (FEN1)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100222912 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
100222912
NCBI-ProteinID:
XP_030129467
Ensembl:
ENSTGUG00000006627
UniProt:
H0Z8A4
LinkDB
All DBs
Position
5:8739228..8742321
Genome browser
AA seq
386 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKAYFGRKVAIDASMSIYQFLIAVRQGADVLQNEDGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
ENIEKYSKRLVKVTPQHTQECKKLLTLMGIPYVEAPGEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLQLTWEQFVDLCILLGCDYCASIRG
IGPKRAVELIREHKSIERIVQQLDTKKYPLPENWLHREAQKLFLEPDVIDPDAVELKWSE
PDEEQLVQFMCGEKQFNEERIRNGVRRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPEP
KGGAKKKAKTNSKPNGTTATKTKKAK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcttggccaagcttatcgccgacgtggctcccggggccatccgggag
aacgacatcaaggcctactttggccggaaagtggccatcgacgcctccatgagcatctac
cagttcctgattgccgtgcggcagggagccgatgtgctgcagaacgaggatggggagacc
accagccacctgatgggaatgttctaccgcaccatccgcatggtggagaatggcatcaag
ccggtgtacgtgttcgacgggaagccaccacagctgaaatccggggagctggccaagcgc
acggagcgccgggccgaggcggagaaacacctgcaggaagcacaggaggctggggaggag
gagaacatcgagaagtacagcaagaggctggtcaaggtgaccccgcagcacacgcaggag
tgcaagaagctgctgacgctgatgggaattccctatgtggaggcacctggagaggcagag
gccagctgtgccgccttggtgaaggctgggaaggtgtacgccgccgccacggaggacatg
gattgcctcaccttcggtagccccgtgctgatgcggcacctcacagccagtgagaccaag
aagctgcccatccaggagttccacctgaaccggattctgcaggatctgcagctgacctgg
gagcagtttgtggacctgtgcatcctgctgggctgcgactactgcgccagcatccgcggc
atcgggccgaagcgcgccgtggagctcatccgggagcacaaatccatcgagaggatcgtg
cagcagctcgacaccaagaagtaccccctgcccgagaactggctgcacagggaggcccag
aagctcttcctggagcccgacgtgatcgatcccgatgccgtggagctgaagtggagcgag
ccggacgaggagcagctggtgcagtttatgtgtggggagaagcagttcaatgaggagcgc
atccgcaacggcgtcaggaggctgagcaagagccgccagggaagcacccagggccggctc
gacgacttcttcaaggtcaccggatccatcacctcggccaagcgcaaggagccggagccc
aagggaggggccaagaagaaagccaagaccaactccaagcccaatggcaccaccgcgaca
aagactaaaaaggcaaaataa
DBGET
integrated database retrieval system