Taeniopygia guttata (zebra finch): 100223052
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Entry
100223052 CDS
T01082
Symbol
NBN
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03440
Homologous recombination
tgu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100223052 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100223052 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgu03032
]
100223052 (NBN)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100223052 (NBN)
DNA replication proteins [BR:
tgu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100223052 (NBN)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100223052 (NBN)
BRCA1-C complex
100223052 (NBN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
PTCB-BRCT
Microp_apicomplexa_4
Motif
Other DBs
NCBI-GeneID:
100223052
NCBI-ProteinID:
XP_030122256
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Position
2:complement(127507175..127534537)
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AA seq
759 aa
AA seq
DB search
MWKLVPASGKGEPYRLLSGVEYVVGRRNCTILIQDDQSISRSHAVLTVSQPETSPSQSLS
VPILTVRDTSKYGTFVNGSKLNGTSVSLQSGDRINFGVFESKFRVEYEPLVVCSSCLDVA
QKKALNQAIQQLGGLVVNEWTNECTHLVMLSVKVTVKTICALICARPIIKPEFFTELIRA
IQSRQQLPNHESFYPPVDEPSIGSENLDLSENHERKKIFSGKTFVFLTAKQHKKLGPAVV
LGGGEVKLMTEGRKEMALLLSPEVCVVDVGLANSQISGSDSLTNWTDSILTVLESKNLRA
IPEAEIGLAVIFMSTEKYCNPQKQHASKGLAAVPESSASAVVGRAISQSLAVNETIMPTA
ADSSTLYIADTEEQTCMEIENTSQVHRQRKMAFHDTTAIKKNSGTSGSVNAGTSIPRGNR
TSGFSQRSQPVSPSKISEAGKSHGSASHHQSNSITNYFQVSRKRERAEEEETSVPKLAKL
EERSSPLPKCTESTTSLIRNTEAKQHQKKNNILDPNASFAEDMSIKPMRESVKVTSDRTN
TETTSSENHAPKRRKELDDLSKDTEALEIVFGSGDIDWEDQMTDHDQEAQSSKRKKQCLE
AKGSRIPEVNVNQREENKVLKEEELGSVLTSEMKSNIKQESPVLNHSKLQDDSSNLPSRL
LLTEFRSLVVSHPRQKSHFPGNTSYGGKKNFKMFKKVAYPGAGQLPHIIGGSDLIAHHAK
KNSELEDWLRQEIEEQNRHAREESLADDLFRYDPNVKRR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctggtgcccgcctcgggaaaaggggagccatatcggcttttaagtggcgta
gaatatgttgttggacgcagaaactgcacaattttaattcaggatgatcagtctatcagt
cgaagtcatgcagttctgactgtaagtcagcctgaaacaagccctagtcagtctctctca
gtacctatattaacagtaagagatacatccaagtatggtacttttgttaatggatcaaaa
ctcaatggtacttcagtgtctttgcagtctggtgacagaatcaactttggagtctttgag
agcaagtttagagtggaatatgaacctttggttgtctgctcctcgtgtttagatgtagct
cagaaaaaggctttaaatcaagccatccagcagcttggaggccttgtagtgaatgagtgg
acaaatgaatgtacccaccttgtaatgttatcagtaaaagtaactgttaagactatatgt
gctttgatttgtgctcggccaattataaagccagagttttttactgaattaatcagagct
attcagtccaggcaacagttgccaaatcatgaaagcttttatcctccagttgatgagcct
tccattggcagtgaaaacttggatttatctgagaatcatgaaaggaaaaaaatattcagt
ggaaaaacttttgtatttctaactgccaagcagcacaagaaactgggtccagcagttgtt
cttggaggaggggaagtaaagttgatgacagaaggaagaaaagaaatggctttactactt
tctcctgaagtttgtgtagttgatgtgggtttggcaaattctcagatctcaggatctgat
tctctgacaaactggactgattccattctgactgtcttggaaagcaagaatcttagggct
attccagaggcagaaattggattggcagttatcttcatgtctacagaaaaatactgcaac
cctcaaaagcagcatgcttccaaaggtcttgcagctgtacctgaaagttctgcatcagct
gttgtaggccgagccatttcccagagtctggctgtgaatgaaaccataatgccaactgct
gcagatagcagcaccttatacatagctgatacagaagagcagacatgtatggagatagag
aatacttcccaggtgcatagacaaaggaaaatggctttccacgatacaactgccataaag
aaaaacagcggcacaagtggcagtgtaaatgcaggaacatcaatacctagagggaacaga
acatctgggttcagtcaaagaagtcagcctgtctcaccatctaaaatttcagaagctggc
aaatctcatgggagtgcttcacatcaccagtccaactcaattacaaattacttccaggtt
tctagaaaaagggaaagagctgaagaagaagaaacatctgtgcccaaactagcaaaactg
gaggaaaggtcatcgcctcttcccaagtgcactgaatctacaacttcattgatccgcaac
actgaagcaaaacagcatcaaaagaaaaataatattcttgacccaaacgcaagttttgca
gaagacatgagtataaagcctatgagggaaagtgtcaaagtaacaagtgatagaacaaac
actgaaaccacgtctagtgaaaatcatgcaccaaaaaggagaaaggaattagatgattta
tctaaagatacagaagcactagaaattgtgtttggaagtggagacatagactgggaagat
caaatgacagatcatgaccaggaagctcaaagcagtaaacgaaaaaaacaatgtttggaa
gccaaaggaagcaggattccagaagtaaatgtaaatcagcgtgaggagaataaagtattg
aaagaagaggagcttggatcggttctaacttcagaaatgaaaagtaatatcaagcaagag
tctccagtcttgaaccacagcaaactgcaagatgactccagcaatcttcctagcaggctt
ctgttgacagagtttagatcactagttgtcagccatccaagacagaagagtcattttcct
ggaaataccagctatggaggaaagaaaaatttcaaaatgttcaaaaaggtagcttatcct
ggggcaggacaacttccacacattattggaggatcagatttgattgctcaccatgctaaa
aagaattcagagttagaagactggttaaggcaagaaatagaggaacagaaccgacatgca
agagaagaatcacttgctgatgatctctttagatatgatcctaacgtgaaaagaagataa
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integrated database retrieval system
