Taeniopygia guttata (zebra finch): 100223061
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Entry
100223061 CDS
T01082
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100223061 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgu01009
]
100223061 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100223061 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100223061 (RB1CC1)
Protein phosphatases and associated proteins [BR:
tgu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100223061 (RB1CC1)
Membrane trafficking [BR:
tgu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100223061 (RB1CC1)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100223061 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
100223061
NCBI-ProteinID:
XP_012427493
Ensembl:
ENSTGUG00000010964
LinkDB
All DBs
Position
2:complement(113223082..113288919)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGAESEETEDGKSP
ELVLYPDVSKVNSKSMLASFCKSVEHSALEGTNPENVKDYKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLTECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSAENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRCQIDKETESLRNEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSDQITELQSKLELEMTALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLISNQEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNRSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLDEKKKLEEEVNKLRSSNYSPSTYLAAASEVCGACAADVPTDTDRLVADFGAEGRMD
SMMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgccgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgtg
catgatgaacatcttcaacatcaaggctgggctgctataatggccaacttggaagattgt
acatactcttatcaaaagctgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctataatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaacacggaggagcagaaagtgaagaaactgaggatgggaaatctcct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcggttgaacattcagctttggaaggcacaaatcctgaaaatgtaaaagattat
aaggaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaactgaaagat
gatgatcaaccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccagccctttctgacagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgacttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtgacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagacgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgag
caaaaggcctcaaatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagt
actacaggaactgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctttgtcctcctgtgtgtcccccagctccgttagaagaattatccccagacagcatt
gatgctcacacgttcgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcattggcagagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaa
agcccggaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagcagaaaacgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggcata
aaagaagatctttgccattttagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttctttagaaatagtaaatacaattgaaaaggtaaagctttcactt
gaaaaaacactaaatgataaacatcaaaatgaactacagtctttgaaaagtgagtatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggtctcgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtggtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgtcaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgt
gaaattgtacttgaggacttgaaaaaacttcatgttgaaaacaatgagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aagttaaaaaaagagaacgagcatagacttgaacaaatgcaggaatcccatgaggtagtt
atgcaagagaaacagcaacaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgcccttaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatgtcagattgacaag
gaaactgaaagcttaagaaacgagatagataaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaatagatacgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttctgaccaa
ataacagaactgcaaagtaagttggagttggaaatgactgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttaatatctaaccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtccaaactgcttgtaaagagttggaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatactgcaacttgagatgcaagtgaatagg
agtcctcctgctgaatcatctgctgaatcaaacttagttgctgaacttcaggagaagctt
caggaagaaaaaatgaagtttttagagcaacttgaagaacaagagaaaagaaagaacgaa
gaaatgcagaacatcagaacatcgctcactgcagagcagcagacaaacttcaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacgcaacagcaagaaaaagataaggatttgattgaaacactttctgaagataga
gctcgcttacttgatgagaagaagaaacttgaagaagaagttaataaactgagaagtagt
aattattctccatcaacctacttggcagcagcatcagaagtttgtggagcctgtgcagct
gatgtgcccacagacacagacagattggttgctgactttggggctgaggggagaatggat
tccatgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgctagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggtactcattatcttggacgaaaggcatgac
aactacgtgttgtttactgttagtccgaccttgtatttcttgcactcagagtcccttgct
gcactggatctcaaaccaggtgagtgtgcatcaggtgcatctcggagaccatgggtgcta
ggaaaagtgatggaaaaggagtattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
