Taeniopygia guttata (zebra finch): 100223225
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Entry
100223225 CDS
T01082
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100223225 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100223225 (FIP1L1)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100223225 (FIP1L1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100223225
NCBI-ProteinID:
XP_030126942
Ensembl:
ENSTGUG00000007834
LinkDB
All DBs
Position
4:26392379..26430637
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AA seq
583 aa
AA seq
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MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGIVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKPDF
TSPPALFKSGIPTNRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIDSGHSSGYDGRPVRAFSYGSDDEVELKTNDSLKVRKASKADKQKGRSPQYFTFPHPA
GSAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRDRDRTRDRERDRDH
SPSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRR
HDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggttgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agtgctccacccccgcctggaagtgaagaggaagctgcagaaaatggcattgtgaaaacg
aaagtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaagacaggagctccacagtttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctcagattattttaac
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttgccagttacctcaaccacaaataaaattacggctgaagacaaagct
atggaagtaagaccaagtgcagagattctcgatggcagataccatcttttaaaggtacag
caaggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaacctgatttc
acatctcctcctgccttattcaaatcaggaattccaacaaacaggcgaatatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gaaaacagcaacatacaggttctttcagaacgctctaatcctgaagtagacagttttacc
aagccacctccatttttccctccaggagctccacctactcaccttccaccacctcctttc
ctcccaccccctccaactgtcagtactgctccgcctctgattcccccaccaggtatacca
ataacagtgccaccaccagggtttccaccaccacctggcggtcctccaccttccctcata
cccacaatagacagtggacattcttctggctatgatggtcgtcctgttcgtgcattttca
tatggcagtgatgatgaagtggagctcaaaacaaacgattcattgaaagttaggaaagct
agcaaggcagataagcagaaagggagaagtcctcagtacttcacctttccacaccctgca
ggttctgcaccctcatggtctagtcttttggacaccagcaaacagtgggattactatgca
cgaagagagaaggatagggaacgtgagagagagagatcccgagatcgggatcgcgaccgg
gaccgggaccgagacagagatcgagaccgtaccagggacagggaaagggaccgagatcac
agtccgtcctcaagtgcgttcaacagtgatgaagaacgctacagatacagagactatgca
gagaggggttatgaccgccataggacaagcagagagaaagaagacagacacagagacagg
agacacagagagaaagaagagactcgacacaagtcatctcgaagtaacagcagacgtcgt
cacgacagtgaagaaggggatagccacagaaggcacaaacacaagaagtcgaaaagaagc
aaagaaggaaaagaagccagtggtgaacctgctcctgaacaggaaaacactgaagctgcc
cctgtggaatag
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