KEGG   Taeniopygia guttata (zebra finch): 100223271
Entry
100223271         CDS       T01082                                 
Symbol
CCNT2
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100223271 (CCNT2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgu03021]
    100223271 (CCNT2)
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100223271 (CCNT2)
    Brd4/P-TEFb complex
     100223271 (CCNT2)
    7SK RNP complex
     100223271 (CCNT2)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 100223271
NCBI-ProteinID: XP_002197956
Ensembl: ENSTGUG00000011715
LinkDB
Position
7:31728063..31753869
AA seq 752 aa
MEAAGGGAAGAGGGGVMAAAGAGSAGSAARGGGGSSAASRWFFSREQLENTPSRRCGVEA
DKELSYRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIMSPTALFLA
AKVEEQPRKLEHVIKVANACLHPQEPQLDTKSDAYLQQAQELVILETIMLQTLGFEITIE
HPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWE
IPVSTDGKHWWEYVDPSVTLELLDELTHEFLQILEKTPSRLKRIRNWRANQAAKKPKGDG
QVSENSLLGSSLVQNSILVDTVTGVAANTSFQKPSTSFPAPVPLTSGSISVPDSHAPENL
AILATGMPSTSYSLASHQEWPQHQEQTRTEQIYSQKQETLPASQYNMNFQAGSSVQLHSG
VHHRPDKLAEHSTVKQEYSHKSANKHHGQVAAPVIIPQKMSLDKYREKRKLETLELDVRE
HYVATPGEQQHKKHLQPQAAGSVTSPIKMKLPIANAEKPEKHLSDKKEKGGSLKLRIPIP
PTEKGASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHVSKEHKDKHKEHSLNRHHGVG
HKHSHSHGGGSKHGTDGVTPSVLRSPVGLSSDGNSSSSGSSRKKLHSNDASHNHHSKMSK
SSKSSGSSSSSCSVKQYVSSHNSVFNLPLPPPPPVTYQVGYGHLSTLVKLDKKPVENGPD
AHPQYSTNSQHMDYKDTFDMLDSLLSAQGMNM
NT seq 2259 nt   +upstreamnt  +downstreamnt
atggaggcggcgggaggcggcgccgcaggagcaggaggaggaggtgtcatggcggcggcg
ggcgcgggctccgcggggtctgcagcgcggggcggcggcggctcctcggccgcgtcgcgc
tggttcttcagccgcgagcagctggagaacacgccctcgcggcgctgcggcgtggaggcc
gacaaggagctttcgtaccggcagcaggcggccaacctcatccaagacatgggccagcgc
ctcaacgtatctcagcttaccataaatactgcaattgtttacatgcacaggttttatatg
catcattccttcacaaaatttaatcgaaatataatgtctcccacggcattgtttttggct
gcaaaagtggaagaacagccacggaaacttgaacatgttattaaagtagcaaatgcctgt
cttcatcctcaagagccacagctggatacaaagagtgatgcataccttcaacaagcccaa
gagctggttatacttgaaacaataatgcttcaaactttaggttttgagattaccattgaa
catccacacacagatgttgtgaaatgtacacagttagtgagagcaagcaaggatttggca
cagacatcctatttcatggctaccaacagccttcaccttaccacattctgtcttcagtac
aagcccacagtgatagcttgtgtgtgcattcacttggcctgcaagtggtccaactgggag
attccagtatcaactgatggaaaacactggtgggaatatgtagatccctcagttactcta
gaattactagatgagctaactcatgagtttctgcaaatactggagaaaacacctagcagg
ctcaagagaattagaaattggcgggctaatcaggcagctaagaaacctaaaggtgatgga
caggtatctgagaactcgcttcttggttcatctttggtccagaattccattttggtggat
acagttactggtgtagctgcaaacacaagtttccaaaaaccatcgacatcgtttcccgca
ccagtacctctgacctcaggaagtatttctgttccagacagtcatgcacctgaaaatttg
gcaatattagctacaggaatgccaagtacctcatacagtttggcatcacaccaggaatgg
cctcagcaccaagaacaaacaagaacagaacaaatatactctcagaagcaggagactctg
cctgctagtcagtacaacatgaacttccaagcagggtcgtccgtgcagttgcactccgga
gtgcaccacagacctgacaaacttgctgagcattctactgtcaaacaagaatattctcat
aagtcagcaaacaaacaccatggacaagttgctgctcctgtaataattcctcagaaaatg
tctttggataagtacagagagaagcgcaaactagaaaccctggaactggatgtcagagaa
cactatgtagcaaccccaggcgagcagcagcataaaaagcacctgcagccacaggcagcc
ggttctgttacatctcccattaaaatgaaacttcctattgcaaatgcagagaagcctgaa
aaacacttgtctgataagaaggagaagggtggctcgctcaaactccgtattccaatccca
cccacggaaaagggtgccagtaaggaggagctgaaaatgaaaatcaaggtttcttcctca
gaaaggcacagctcgtcggacgagggcagcggcaagagcaaacactcgagtccccacgtt
agcaaagagcacaaggacaaacacaaagagcactcgctgaaccgccaccacggcgtgggc
cacaagcactcccactcgcacggcggcggcagcaagcacggcactgatggagtgacgccc
tctgtgctgaggagtcccgtgggcctgagcagcgatggcaattcctctagttccggctcc
tcgaggaagaagttgcacagcaatgatgcttctcacaaccaccactccaaaatgagcaaa
agttccaaaagttcaggtagttcatctagttcttgctctgttaagcagtatgtatcctct
cacaactctgtttttaaccttcccttaccccctcctccccctgtcacataccaggtgggc
tacggacatctcagcaccctcgtgaaactggacaagaaaccagtggagaacggtcctgat
gcccatccccagtacagtacaaacagccagcatatggactacaaagacacattcgacatg
ctggattcgctgttaagtgcccaagggatgaacatgtag

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