Taeniopygia guttata (zebra finch): 100223390
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Entry
100223390 CDS
T01082
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100223390 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tgu01007
]
100223390 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100223390 (FARSB)
Enzymes [BR:
tgu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
100223390 (FARSB)
Amino acid related enzymes [BR:
tgu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
100223390 (FARSB)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100223390 (FARSB)
Prokaryotic type
100223390 (FARSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
100223390
NCBI-ProteinID:
XP_030136208
Ensembl:
ENSTGUG00000007788
UniProt:
H0ZBW1
LinkDB
All DBs
Position
9:complement(8405456..8441940)
Genome browser
AA seq
589 aa
AA seq
DB search
MPTVSVKRELLFQALGRSYTDEEFDELCFEFGLELDEITSEKDIISKEKGEEKAKGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERINLPRFEKIIPAEGEGQRLIITEQTAQIRP
HAVAAVLRNITFTKDRYDSFIDLQEKLHQNICRKRALVAIGTHDLDTITGPFTYTAKAPS
EIKFKPLSQSQEYTASQIMDLYRTDSHLRHYLHLIENKPRYPVIYDSNGVVLSMPPIING
EHSKIRLNTRNVFIECTGTDITKAKIVLDTIVTMFSEYCEKPFTVEAVEVVYPNGKTHIY
PELAYRTEKVKPEYINKKVGISESPSSLAKLLTRMCLKSHVTGNGNHIEIEIPPTRADII
HACDIVEDAAIAYGYNNIQMVIPKTYTIANQLPLNKFTELLRVDLAAAGFTEALTFALCS
QEDIADKLRTDISATKAVRIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVVKDPNTDVGARNYRHLCAIYYNKSPGFEIIHGLLDRVMQVLEVPPNEENGYTIKAAEG
TAFFPGRCAEVFAKGQSIGKLGVVHPDVITKFELTMPCSVLEINIEPFV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcagcgtgaagcgggagctgctgttccaggcgctgggcaggagctacacg
gatgaagaatttgatgagctttgctttgagtttggtttggagcttgatgaaattacatct
gagaaggatattataagtaaagaaaagggtgaagaaaaggccaagggcgcgtctgatgtg
gttctctataaaattgatgttcctgccaaccgctatgatctgctttgcctggaagggttg
gtccgaggactgcaggtctttaaggaaaggataaatctccctaggtttgaaaagataata
ccagctgagggtgaaggtcagaggctgattatcactgaacagactgcccagatccggcct
cacgctgtagctgccgtcctccgaaatataacttttaccaaggaccggtatgacagtttc
atcgacctccaagagaaactgcaccaaaatatttgcaggaaaagagcattagtagcaata
ggtacccatgacttggataccatcactggtccatttacgtatacagccaaagcaccttct
gaaattaaatttaagcccttgagtcaatcccaggagtacacagcctcacaaattatggat
ctgtataggactgacagccaccttcggcactatttgcacctgattgaaaacaagccacgt
tatcctgtcatttatgacagcaatggggttgttctgtccatgccaccaatcatcaatgga
gagcattcaaaaataaggctaaataccagaaatgtgtttattgaatgcacaggcacagat
attacaaaggcaaaaattgttcttgatactatagtcacgatgttcagtgaatactgtgag
aagccattcactgttgaagcagtagaagtggtttatcccaatgggaagacccacatctat
ccggagctggcttatcgaacagagaaggtgaaacctgaatacattaacaagaaagtagga
atcagtgaatctccatcaagcctggcaaagctgctgactaggatgtgtttgaagtcacac
gtcacagggaatgggaaccatatagagattgaaatccctcctaccagagcagacattatc
catgcctgtgatatcgtagaagatgcagcaatagcttatggttataacaacattcagatg
gtgattccgaaaacgtacaccatagctaatcaactccccctcaataagttcacagaactt
ctgagagtggacttggcagctgctggattcactgaagcactcacttttgccctgtgttct
caagaagatattgcagataaacttcgcacggacatctctgcaacaaaggccgtgcgcata
gcgaaccccaaaacagcagaatttcaggtggcacgtacaaccctccttcctgggctgctg
aaaactattgctgccaacagaaagatgcccttgcctctcaaactctttgagatttctgat
gttgtagtaaaagatcctaatacagatgtaggggcaagaaactacagacatttatgtgct
atttattacaacaaaagcccaggctttgagatcatccatggtttactggacagagtcatg
caggtcttggaagtaccaccaaatgaagagaatggctacaccatcaaggcagctgaaggc
actgctttctttcctggtcgctgtgctgaggtctttgccaaaggtcaaagcattgggaaa
cttggagtcgtacaccctgatgttatcaccaagtttgagctcaccatgccttgctctgtc
ctggagatcaacattgagcccttcgtgtga
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