Taeniopygia guttata (zebra finch): 100223481
Help
Entry
100223481 CDS
T01082
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
100223481 (DSCAML1)
Cell adhesion molecules [BR:
tgu04515
]
Immunoglobulin superfamily
DSCAM family
100223481 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
100223481
NCBI-ProteinID:
XP_030146749
Ensembl:
ENSTGUG00000000198
LinkDB
All DBs
Position
24:6395686..6490247
Genome browser
AA seq
2045 aa
AA seq
DB search
MWLVTFLLLYSLPKARAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIIMLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTGPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQAQHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPA
PAASAAPAPPVPAEPPVAAATSEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYSK
SYTLV
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacgcgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacgggtgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcagagaactcggctggcaaaatcaggagccccaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatatgttagcgttgtatcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccggctctccgtctcagacccg
gcggagtccatccccacgatgttagacagcttccagtcgcgggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggaccaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacgggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggcggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcccagaagagccactcc
ggggcctaccagtgctttgccacccgcaagtcccagacggcacaggacttctccatcatc
atgctggaggatgggaccccccgtatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggccccgccacccaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tccgatggcaccaccgtcagccacatgaacgtgaccggcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgcgccatgaagaacataacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tctctgctgctgcccgataaccaccgccaagtggtctttgagaatggcaccctgaagctg
atggatgtccagaaaggcatggatgaaggggagtatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctccgctgatccagccc
ttcgagttcccaccagcctccatcgggcagctgctctacatcccctgcgtggtctcctct
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctctggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagtgtctcgctc
aagcacaacgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttatggaaaagccggggtgctgaactgctctgttgatgggtacccccctcccaaagtc
atgtggaagcacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccggccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacggcgcggggcgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgcggggac
tccgtcttcttctcctgtcacgccatcaactcctacggcgaggacagaggcttgatccag
ctcacagtccaagagccccctgacccgccggagctggagatccgcgaggtgaaagcccgg
agcatgaatttgcgatggacgcagcggttcgatggcaacagcatcatcaccggcttcgat
atcgagtacaagaacaagtcagattcctgggattttaagcagtctacacgcaacatctcc
ccaaccatcaaccaggcgaacatcgtggacctgcaccccgcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcccgatggccctcccatggatgtcaccttgcagccgatcacgtcccag
agcatccaggtcacctggaaggccccgaagaaggagctgcagaacggggtgatccgtggc
taccagatcggctaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtctacacgctggacaacctcaagaagtttgcgcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccctcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaacgtgcgagccatctcc
atcacctcggacgtggccgtgatctcctggtcggagcccccgcgcagcaccctcaacggg
gtgctcaaggggtaccgcgtcatcttctggtccctctacatggacggagagtggggcgag
atgcagaatatcacgaccacgcgggagcgagtggagctgcggggcatggagaaattcacc
aactacagcgtgcaggtgctggcctacacccaggcgggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccagctgggatcaaggctgtgccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggctcccagcgagtac
gagaccagccccgaccagctcttctaccgcatcgcccacctgaaccgggggcagcagtac
ctgctctgggtggccgccgtcacctccgccggccgcggcaacatcagtgagaaggtcacc
atcgagcccgcgggcaaagcccccgccaagatcatctccttcggaggcaccgtcaccacg
ccgtggatgaaggacgtgaggctgccgtgcaactccgtcggggagccggtccctgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacagtggacgggcaccgcctg
atccaggccaacgggacactggtgctgcgctcggtgaaagccgaggactccggctactac
acctgcactgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccagaccagccccgcctgaccgtctccaagacctcggcatcgtccatcacgctg
gcctggatccctggggacaatgggggcagctccatccgaggcttcgtgctccagtactca
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctctgagcgctccttcaag
ctggagagcctcaagtgtggcacctggtacaaggtgaagctggcggccaagaacagcgtc
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcacggccatcgtgctggagtaccggcccaagggc
aactgggtgtggcagagcctgcgcaccaacagctccagcgaggtgttcctgaccgagctg
cgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccacgcagttcgccacgctggactacgacggcagcaccatccccccgatcaagtct
gctcaaggggagggtgatgacgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggttg
aagaggcttcgagatgcaaagagtttggcagaaatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaaggggcccccacagggcccccgcctgcacatcgacatcccgcgg
gtgcagctcctcatcgaggacaaggagggcatcaagcagctaggggatgacaaagccacg
atcccggtgaccgacacggagttcagccaggcagtgaacccccagagcttctgcacgggc
gtctctctgcatcacccagccctgatccagaacacggggcccctcattgacatgtccgac
atccgccccggcaccaaccccgtgtcgaggaagagcgtgaagtctgctcacagcacccgc
aaccggtactccagccagtggacactcaccaagtgccaggcgtccacccccgcgcggacc
ctcacctcggactggagaaccgtgggctcccagcacggcatcacggtcaccgagagtgac
agctacagcgccagcctctcgcaggacacagacaaggggcggaacagcatggtgtccacg
gagagcgcctcgtccacctacgaggagctggcgcgcgcctacgagcacgccaagctggag
gagcagctgcagcacgccaagttcgagatcaccgagtgcttcatctccgacagctcctcg
gaccagatgaccacgggcaccacggacaacgccgacagcatgacctccatgagcaccccg
tccgagcccggcatctgccgcttcaccgcctcgccgcccaagccccaggacagcgagcgg
ggcaagggcgtggccgtgcccatcccacaccgcgccagcaagagtgactactgcaacctc
ccgctgtacgtcaagtcggaggccttcttccgcaagccggacgcgcacgagccgtgcccg
gtggtgccgccgcgggaagcctccatccgcaacctggcccgggcgtaccacgcacaggcc
cagcacatgacgctggagcccggcgccaagcccctggggctgcctcccccggcctccgcc
gcaaccaccttacctcagaggactctccccatgcccggcccggccggccccgcgcccgcg
cccgccgccagcgccgccccggctccccccgtgcccgccgagccccccgtggccgccgcc
accagcgaggcgcgggtgcccacgcactccaaagtggggggctccagggactcgctgctg
gagatgagcacgtcgggggtaggcaggtctcaaaaacagggtgccggagcctactccaag
tcctacacgctggtgtag
DBGET
integrated database retrieval system
