Taeniopygia guttata (zebra finch): 100223558
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Entry
100223558 CDS
T01082
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X2
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100223558 (SMARCAD1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100223558 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
100223558
NCBI-ProteinID:
XP_030127570
LinkDB
All DBs
Position
4:complement(51415484..51455698)
Genome browser
AA seq
922 aa
AA seq
DB search
MFAPQSFNLRQLLEKEKNISSYNSELYDDDDQPEEEMSQLAHVNGGEQQPAVKEHLEKDT
RDSKLQTMKERFPQRSDQELLKLIESACTMDEAVAAGLKLNDKAASSKRKERDSPTNCKT
KNERVAKKSKVSYLDDSEPKRQWERQEMLVKKLQSTFPGLDKEELREVLEEHNWVFHDAL
EALKIFADDEEGMEFPPKRKVADWTEASTKTQSEESKDKMKQKASEKEQNGFQKKDKVKR
SILSAERETDHVEDESSSEDGGSSLDEDYSSGDEVMEDSYKAKILSFLQDASLSELTLIP
QCSQKKAQKIIALRPFNSWEALFTKMTKTSGLSEDIVWNCKILLKEREVVLKLMNKCEDI
SNKLTKQVTRITRDGECGWNIEQPSILNRSLKLKPYQKIGLNWLALLYKHRLNGILADEM
GLGKTIQAIAFLAYLYQEGNKGPHLIVVPASTLDNWIREVHLWCPELNVLFYYGSQEDRK
HLRLDIHNKVVDFNVIVTTYNSAMSSSDDRGLFRRLKLNYAIFDEGHMLKNMSSIRYQHL
MTINAKNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSAEEQSIYE
KERIAHAKQIIKPFILRRVKDEVLKQLPPKKDLIELCAMSEKQEQLYLALLNKLKKSINS
NENNSNMGNAMMQLRKMANHPLLHRQYYTNDKLRTMSTLMLKEPTHCDANPDLIFEDMTV
MTDFELHVLCKQYSHINDFMLDMDQILDSGKFRALERILSNLKEKGDRVVLFSQFTMMLD
ILEVLLKHWQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANIV
ILHDIDCNPYNDKQAEDRCHRVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAA
ESGEEGSIPADIATLLKASLGL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccccccaaagcttcaacttaaggcagctacttgaaaaggagaaaaatattagc
agttacaactctgaactgtatgatgatgatgaccagcctgaggaggaaatgtcccagctg
gcacatgtaaatggtggggagcagcagccagctgtgaaggagcatttagagaaggatacc
agagactccaagctgcaaacaatgaaggaacgttttccccagagaagtgaccaagaatta
ttaaaactgatagaatcagcatgcacaatggatgaagcagtagctgctggcttgaagctc
aatgacaaagctgcctctagtaaaaggaaagaaagagattctcccacaaattgcaaaacc
aaaaatgagcgagttgcaaaaaagtcaaaagttagttatctggatgattcagaacccaaa
agacaatgggagaggcaagagatgcttgtgaagaagttgcaaagtacattccctggattg
gataaggaggagctgagagaggtacttgaggaacataactgggtgtttcatgatgcactg
gaggccctgaaaatatttgcagatgatgaggagggtatggaatttcctcccaaaaggaaa
gttgctgactggaccgaagcctctactaaaacccaaagcgaggagagtaaagataagatg
aagcagaaagcttctgagaaagagcagaatggctttcagaaaaaggacaaagtcaaaagg
agcattttgagtgctgagagagaaacagatcatgtggaggatgagtcctcttctgaagac
ggtggaagctccctggatgaggactacagcagcggtgatgaagtgatggaggatagctac
aaagcgaaaatcctcagcttcctgcaggatgcttccctgagtgaactgactctgattccc
cagtgttctcagaaaaaggctcagaagataatagcactccggccctttaacagctgggag
gctctgtttactaaaatgacgaagacttctggtttgtcagaagatatagtgtggaactgt
aagatactgctgaaggagagggaggtggttctaaagctcatgaataaatgtgaagacatt
tccaataaactgacaaaacaggtaaccaggattactagagatggagaatgtggatggaac
atagagcagccctccattctgaatcgcagtttgaaactgaagccatatcagaagattggt
ttgaactggttagcactgctgtataagcacagattgaatggcatcttggctgatgaaatg
ggcttagggaaaacaattcaagctattgcatttctggcttatctttaccaagagggcaat
aaaggtccccatttgatagttgtaccagcttcaacattagataactggataagagaagtt
catctgtggtgtcctgaactgaatgtcctcttttactatggatcccaagaagataggaaa
catctcaggttggacattcacaataaagtagttgatttcaatgtgattgtgactacatac
aactctgcaatgagcagctcagatgatcgaggactgttccgcaggctgaagcttaactat
gcaatttttgatgaaggtcatatgctcaagaacatgagctctatccgctaccagcacctc
atgacaattaatgccaagaatcgcttgctgctaacagggactccagttcaaaataatctg
ttggaattgatgtccctcttaaattttgtcatgccccatatgttcagcagtagcactagt
gaaattcgaaggatgttctcttcaaaaactaaaagtgcagaagaacaaagcatatatgag
aaggagagaatagcacatgcaaagcagataataaagccattcatcttgagaagagtaaaa
gatgaggtccttaaacaactacctcccaaaaaagatctcattgaactgtgtgccatgtct
gagaaacaggagcaactctacttggctcttttaaacaagctcaagaaaagcattaacagt
aatgagaataactccaatatgggaaatgcaatgatgcagcttagaaaaatggctaatcat
cctcttttgcatcgtcagtattacacaaatgacaagctcaggacaatgtccaccctcatg
ctcaaggaacccacacattgtgatgctaaccctgaccttatctttgaagatatgacagta
atgacagattttgagctgcatgttctttgtaagcaatattctcacatcaatgacttcatg
ttagacatggatcagatcctggattctgggaagtttagagcattggaacgcattctctcc
aaccttaaagagaagggtgacagagttgtgttgtttagccagttcacaatgatgctggac
atcttggaagttttgctaaaacactggcaacatagatacctcaggctggatggaaaaaca
cagatttctgagcggatacacctgatagatgagttcaatacagatatggatatatttgta
ttccttctgtccaccaaagctggaggcttgggcattaatctgacctcggccaacattgtt
atccttcatgacattgactgcaacccttacaacgataagcaggccgaagaccggtgccac
agggtggggcagacacgagaagtacaagtcataaagctcattagcaaggggactattgaa
gaaaccatgctaaaaatcagccaacagaaactgaagttagaacaagatatgactgcagca
gaatcaggagaagaaggaagcattccagcagatatagccacactattaaaagcttcattg
ggtctctaa
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