Taeniopygia guttata (zebra finch): 100223590
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Entry
100223590 CDS
T01082
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100223590 (CHAF1B)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
100223590 (CHAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
CAF-1_p60_C
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
eIF2A
Beta-prop_HPS5
Beta-prop_ELP1_1st
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_SCAP
Ge1_WD40
Beta-prop_DCAF12
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
100223590
NCBI-ProteinID:
XP_030140220
Ensembl:
ENSTGUG00000004832
UniProt:
H0Z339
LinkDB
All DBs
Position
1:complement(112302967..112316606)
Genome browser
AA seq
607 aa
AA seq
DB search
MKVITCEIVWHNKEPVYSLDFQHGADGRINRLASAGVDTAVRIWKVEKGPDGKAIVEFLS
NLARHTKAVNVVRFSPSGDMLASGGDDAVILLWKLNDSKELEPLVFQDEDEAQLNKENWA
VIKTLRGHLEDVYDICWTSDGNYMASASVDNTAIMWDVNKGQKVSIFNEHKSYVQGVTWD
PLGQYIATLSCDRVLRVYSTQTKRVAFNVTKMPSGSGAEGEVRSFRMFHDDSMKSFFRRL
SFTPDGSYLLTPAGCVESGENVTNTTYVFSRNNLKRPVGHLPCPGKGTLAVRCCPVYFEL
RGASAKDEISPKSPPALFNLPYRLVFAVASEDSVLFYDTEQSFPFGYVSNIHYHTLSDIS
WSSDGSFLAISSTDGYCSFVTFEEDELGVPLKEKPQIHLRTPGAAADKKAKKSQSHKVIS
PSSKLAEGTPPSKDPPLQPQTPSTAGKELPSTPVGIKSSPVPSPSTPVGIKSSPVPSPST
PVGIKTAPVPSPSTPVGIKTSPVPSSEERRSSQAGTQSSRAPQPRRVTLTTLQSCFKTPR
RINLISLKPDTPTSAYPDPAPTPPSSQQEHENPLPSDESLQAPPAPKRARTEELSLPGDQ
TSCESNK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcatcacatgtgaaatagtgtggcataacaaggagccggtttacagcttggac
ttccagcatggggcagatgggaggatcaatcgcctggcctcggcaggggtggacacagcc
gtgaggatctggaaagtggagaaaggcccggatggaaaagccatcgtggagttcctgtcc
aacctggcgcgccacaccaaagccgtgaacgtcgtgcgcttctctcccagcggggacatg
ctggcctcgggaggggatgatgctgtcattttgctgtggaagctgaatgacagcaaagag
ctggagccgttggtttttcaggatgaagatgaagctcagctcaacaaggagaactgggca
gtcattaaaactttgagaggccacttggaagatgtgtatgatatctgttggacctcagat
ggaaattacatggcatctgcttctgtggataacacagcaatcatgtgggatgtcaataaa
ggacagaaagtttcaatatttaatgagcacaagagttatgtccaaggagtaacctgggat
cctctaggccagtatattgcaaccctgagttgtgacagggtcctgcgagtttacagcacc
caaaccaagcgagtggccttcaatgtcaccaagatgccatcggggtcgggagctgaagga
gaggtgaggagctttcggatgtttcacgatgacagcatgaagtcgttcttccgcaggctg
agcttcactcctgatggctcctatctgctcactccagctggctgtgtggaatcaggagag
aacgttacaaacaccacctatgttttctccagaaacaatctcaaaaggcccgtggggcac
ctgccctgccctggcaagggcaccctggctgttcgctgctgcccggtgtactttgagctg
agaggagcctctgctaaagatgaaatcagtcccaaatccccccctgccctgttcaacctc
ccctatcgattggtgtttgctgttgcttcagaagattctgtgcttttttatgacactgag
cagtccttcccctttggttacgtctccaacatccattaccacaccctgagtgacatttct
tggtccagtgatggatccttcctggccatttcctccacggatgggtactgctcctttgtc
acctttgaggaggatgagctgggagtgcccctgaaggaaaagcctcaaatccacctcagg
actcctggagcagcagcagacaagaaagccaagaagagccaatcccacaaagtgatttcc
ccaagctccaagctggcagaggggacccctccgagcaaggatcccccactgcaaccccaa
acccccagcactgctgggaaggagctgccttccacccctgtgggcatcaaaagctctcca
gtgccatccccttccacccctgtgggcatcaaaagctctccagtgccatccccttccacc
cctgtgggcatcaaaacggctccagtgccatccccttccacccctgtgggcatcaaaacc
tctccagtgccatcctcagaggagaggagaagcagccaggcaggcacccagagcagcaga
gccccccagcccaggagagtcaccctcaccactctgcagtcctgtttcaaaacacccagg
agaataaatttgatttccttgaagccagacaccccaacctctgcatatccagacccagcc
cccacccctccttcctcacaacaggagcatgagaatccattgccatctgatgagagcctc
caagctcccccagcaccaaaacgtgccaggactgaggaattgtcccttcctggagaccaa
accagctgtgagtccaacaaataa
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