Taeniopygia guttata (zebra finch): 100223696
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Entry
100223696 CDS
T01082
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100223696 (LCMT2)
Enzymes [BR:
tgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
100223696 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
100223696 (LCMT2)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100223696 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_1
Glyoxal_oxid_N
Kelch_3
EipA
Motif
Other DBs
NCBI-GeneID:
100223696
NCBI-ProteinID:
XP_012424861
Ensembl:
ENSTGUG00000000626
UniProt:
H0YQS7
LinkDB
All DBs
Position
1:114315827..114335821
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AA seq
682 aa
AA seq
DB search
MRVSSGSAVSSSRQVQGTGGSSAVSKCSAAARGYIQDRFLRLLAGRRRRRRAPLIHRGYY
IRARAVDHCVQDFLLKTQSLPRTQILSLGAGFDSLYFRLKDMGLLHHTVVYEVDFPNVAC
QKATLIKGLKELSALVGDTGGKGLGAITFSGDDYKLLGVDLSELPELERTLEEAGLNNEI
PTLFIAEVVLTYMENTRSDALIEWAAEHFPQACFLLYEQVHPEDPFGRVMQQHFRQLNTA
LRSLAQYPDCKAQQRRFLGKGWTECSVMDMNEFFTCCIPEDEQQRVQTLEPFDEYEEWHL
KCSHYFVLAASKGMEPSWTPLSPSMAVPGPVGMAGSVPAAVCARLSGIPGLRRYGHHSVL
IKPNMILTTGGFGEEDGQHCRVRNFHVLSKHAGHWEAVCVTQNMPEKRWGERLYHTVSCL
SDTLALMVGGRTSPSSTGLGMLWLKFPETCDASGPDDVAVELVSLQPAVEAAVLRWRHST
TEITFKGEQYLFVYGGRSALEPVLGDWHFLHTPELSYVVIAVEGPVPESRHSHSACSWEG
GVLIAGGLGAAEQPLGSVFLLRELEHGFQWQTIETHPPLVPRYSHTAHVHEGKLLLVGGV
WFHAPSVPGVTVIDLMTGVCLNYGINVEHLEWPLMLHNHSSIFLPNEKELLIIGGGGNCF
SFGTHLNQEPVLLSLSSILTSH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcagcagcggcagcgccgtgtcgtcgtcccggcaggtccagggcaccggcggc
agtagcgccgtcagcaagtgctcggcggcagcgcggggctacatccaggatcggttcctg
cggcttctggcgggacggcggcggcggcggcgagcgccccttatccatcggggttattac
atccgtgcccgtgctgtagatcactgtgttcaggacttcctgctgaagacacaaagccta
cccaggacacagatcctatctttaggtgctggctttgattccttatacttccgtttgaag
gatatgggtcttctgcatcacactgtggtatatgaggtagatttcccaaatgtggcatgc
caaaaagctactctgatcaaaggactgaaagagttgtcagcactggtgggagacactgga
gggaaaggattaggagccattaccttttctggagatgattataaattactgggagtggat
ttatcagagctacctgagctggagagaaccctggaggaagcaggactgaacaatgaaatc
cccaccctcttcatcgcagaggtggtgctcacctacatggagaacaccaggtcagatgcc
ttgattgagtgggcagcagagcatttccctcaggcgtgcttcctgctgtatgagcaggtg
cacccagaggacccctttggacgtgtcatgcagcagcatttcaggcagctgaacactgca
ctgcgctccctggcacagtaccctgactgcaaggctcagcagaggcgcttcctgggcaag
ggctggactgagtgcagtgtcatggatatgaatgagtttttcacctgttgtattccagaa
gatgagcagcaaagagtgcagactctggagccttttgatgagtatgaggagtggcatctg
aaatgttctcattactttgtgttggctgcatcaaaggggatggaaccttcctggaccccg
ttgtcacccagcatggcagttcctggtcctgttgggatggcagggagtgtccctgcagca
gtgtgtgcaaggctgtcaggaattcctggcctgagacgttatggtcaccactctgttctt
ataaaacccaacatgattctcaccacgggaggctttggggaggaggacggacaacactgc
cgtgtgagaaatttccacgtgctgagtaagcatgcaggccactgggaagctgtctgtgtc
acacagaatatgcctgagaaaagatggggtgagaggctgtaccatactgtgtcttgtctc
tcagacactctggctctcatggtaggaggacgaacatccccatcgagcacaggcttggga
atgttgtggctgaagttccccgaaacctgtgatgcttcaggcccagatgatgttgcagtg
gagcttgtaagtctgcagcctgctgttgaagcagcagttttgcgttggagacacagcaca
actgaaattacattcaaaggtgagcagtacctgtttgtgtatggtggccgttctgctctg
gagcctgtgcttggggactggcatttcctgcacactccagaactctcctacgttgtgatt
gctgttgagggtccagtcccagaaagccgccactctcacagtgcctgcagctgggaagga
ggtgtgctgattgcaggaggtctgggagcagctgagcagcccttgggttcagttttcctg
ctgagggagcttgaacatggctttcagtggcagactatagagacacaccctcctcttgtc
ccaaggtattcacatactgcacatgtgcatgaaggaaagcttctgcttgttggtggagtg
tggtttcatgcaccctctgtgccaggtgtcactgtcatcgacttaatgactggtgtctgc
ttgaactatgggattaatgtggagcacctggagtggccactaatgctacataatcatagc
agtatctttctgccaaatgaaaaggagctgttgattattggtggtggtggaaactgcttc
tcctttgggacacacttgaaccaagagcctgtcttgctgagcctcagcagcatcctgacc
agtcactga
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