KEGG   Taeniopygia guttata (zebra finch): 100223752
Entry
100223752         CDS       T01082                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100223752 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100223752 (NUP43)
   03036 Chromosome and associated proteins [BR:tgu03036]
    100223752 (NUP43)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100223752 (NUP43)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100223752 (NUP43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_SCAP KNTC1_N CPSF_A Beta-prop_DCAF12 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 100223752
NCBI-ProteinID: XP_030123857
UniProt: H0ZM68
LinkDB
Position
3:complement(55678811..55687896)
AA seq 374 aa
MEDVSAKFVSQKISRTRWRPLPAAALQPPDLFATGSWDNEDNRISIWSAGDLGNAGLNGE
YHGEPHLLCDIQHNGDVMDMQFLDQERIVVASSTGTVTVFHHHQNNQTLSADHRWEKAHY
HVDQDTACGGAACTGVVCNNPEIVTVGEDGRINLFRADQKDAVRTIDNADSSTLHAVTFL
RTTEILTVNSIGQLKIWDLRQQRNEPSQIFSLAGDRVPLHCVDRHPNQQHIVATGGQDGM
LSIWDIRQGTMPVSLLNAHEAEMWEVHFHPSDPDHLFTCSEDGSLWHWDTSTNVSEKPSF
LHQGGRSTAYLSHSTINQSVVSAWLSSDPTKDRMEITNLIPNQTLSVNSLDVLGPCLVYG
TDAEAIYVNRHLFA
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggaggacgtgagcgccaagttcgtgtcgcagaagatcagccggacgcgctggcggccc
ctgcccgccgccgcgctccagccccccgacctcttcgccaccggctcctgggacaacgag
gacaacaggatctccatttggtctgctggcgaccttggaaatgcgggcctcaacggtgaa
tatcatggagaacctcatttgctgtgtgacatccagcacaacggtgatgttatggatatg
cagtttttggatcaagagagaattgtggttgcctcatcaacaggaactgtaactgtattc
catcatcatcaaaataaccagacattatctgctgaccaccggtgggagaaagcccattat
catgtggatcaagacacagcttgtggtggagcagcctgtacaggagttgtctgcaacaac
ccagaaattgtcactgttggagaagatggtagaataaatctcttcagggctgaccaaaaa
gatgcagtaagaactatagacaacgcagacagcagtacactccatgcagtgactttcctt
cgcacaactgagatcttgacagtaaactcaattggacagttaaaaatatgggacctcaga
cagcaaagaaatgagccatctcaaatattttctctggcaggtgacagagttccactgcac
tgtgtggataggcatcccaatcaacagcatattgtggccacagggggccaggatggaatg
ctgagtatatgggacatcaggcagggtactatgccagtgtccctgctaaatgctcatgaa
gcagaaatgtgggaagttcacttccatccctctgaccctgatcatttattcacgtgttct
gaagatggatctctttggcactgggatacttccacaaatgtatctgaaaaaccatctttt
cttcatcaaggaggaagaagcactgcctatctttcccacagtaccattaaccagtctgta
gtaagtgcctggctaagcagtgatccgaccaaagaccgcatggaaatcaccaacctgatt
ccaaatcagactttgtctgtgaatagtttagacgttctaggaccatgcctggtatatggt
actgacgcagaggctatttatgtgaacagacacctttttgcatga

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