Taeniopygia guttata (zebra finch): 100223752
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Entry
100223752 CDS
T01082
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100223752 (NUP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100223752 (NUP43)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100223752 (NUP43)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100223752 (NUP43)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100223752 (NUP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_SCAP
KNTC1_N
CPSF_A
Beta-prop_DCAF12
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
100223752
NCBI-ProteinID:
XP_030123857
UniProt:
H0ZM68
LinkDB
All DBs
Position
3:complement(55678811..55687896)
Genome browser
AA seq
374 aa
AA seq
DB search
MEDVSAKFVSQKISRTRWRPLPAAALQPPDLFATGSWDNEDNRISIWSAGDLGNAGLNGE
YHGEPHLLCDIQHNGDVMDMQFLDQERIVVASSTGTVTVFHHHQNNQTLSADHRWEKAHY
HVDQDTACGGAACTGVVCNNPEIVTVGEDGRINLFRADQKDAVRTIDNADSSTLHAVTFL
RTTEILTVNSIGQLKIWDLRQQRNEPSQIFSLAGDRVPLHCVDRHPNQQHIVATGGQDGM
LSIWDIRQGTMPVSLLNAHEAEMWEVHFHPSDPDHLFTCSEDGSLWHWDTSTNVSEKPSF
LHQGGRSTAYLSHSTINQSVVSAWLSSDPTKDRMEITNLIPNQTLSVNSLDVLGPCLVYG
TDAEAIYVNRHLFA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgagcgccaagttcgtgtcgcagaagatcagccggacgcgctggcggccc
ctgcccgccgccgcgctccagccccccgacctcttcgccaccggctcctgggacaacgag
gacaacaggatctccatttggtctgctggcgaccttggaaatgcgggcctcaacggtgaa
tatcatggagaacctcatttgctgtgtgacatccagcacaacggtgatgttatggatatg
cagtttttggatcaagagagaattgtggttgcctcatcaacaggaactgtaactgtattc
catcatcatcaaaataaccagacattatctgctgaccaccggtgggagaaagcccattat
catgtggatcaagacacagcttgtggtggagcagcctgtacaggagttgtctgcaacaac
ccagaaattgtcactgttggagaagatggtagaataaatctcttcagggctgaccaaaaa
gatgcagtaagaactatagacaacgcagacagcagtacactccatgcagtgactttcctt
cgcacaactgagatcttgacagtaaactcaattggacagttaaaaatatgggacctcaga
cagcaaagaaatgagccatctcaaatattttctctggcaggtgacagagttccactgcac
tgtgtggataggcatcccaatcaacagcatattgtggccacagggggccaggatggaatg
ctgagtatatgggacatcaggcagggtactatgccagtgtccctgctaaatgctcatgaa
gcagaaatgtgggaagttcacttccatccctctgaccctgatcatttattcacgtgttct
gaagatggatctctttggcactgggatacttccacaaatgtatctgaaaaaccatctttt
cttcatcaaggaggaagaagcactgcctatctttcccacagtaccattaaccagtctgta
gtaagtgcctggctaagcagtgatccgaccaaagaccgcatggaaatcaccaacctgatt
ccaaatcagactttgtctgtgaatagtttagacgttctaggaccatgcctggtatatggt
actgacgcagaggctatttatgtgaacagacacctttttgcatga
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integrated database retrieval system