Taeniopygia guttata (zebra finch): 100223780
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Entry
100223780 CDS
T01082
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100223780 (WDTC1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100223780 (WDTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TPR_17
Beta-prop_WDR75_1st
TPR_19
WD40_RFWD3
ANAPC4_WD40
TPR_2
Beta-prop_WDR90_POC16_2nd
TPR_1
ANAPC3
Beta-prop_HPS5
TPR_11
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
TPR_6
NBCH_WD40
TPR_16
Beta-prop_IFT140_1st
Barstar
Motif
Other DBs
NCBI-GeneID:
100223780
NCBI-ProteinID:
XP_002194096
Ensembl:
ENSTGUG00000000973
UniProt:
H0YRT6
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All DBs
Position
23:3758613..3782772
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AA seq
691 aa
AA seq
DB search
MLGCTAALPTASLPLPHCEKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLE
AELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLP
HSGDRILITGAADSKVHVHDLTVKETVHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIR
QYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNH
RKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDG
TELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFR
LAEGRAHVSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAA
AYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFP
EQAHSSACDALDRDINAALFSKSDNAEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDY
KFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCL
QPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLN
MGYRITGLTSGGAGGSDDEDSSEGQVQCRPS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatgcacagcagctcttcccacagcttctcttcctctgccccactgcgagaag
atggcaaaagccaacatcaccagggacatcatccacaggcagatcaaggagaggggagca
ctgggcttcgagcgccactaccacgtcaccgaccccttcatccgccgcctggggctggag
gctgagctgcagggtcactctgggtgtgtcaactgtctggaatggaatgaaaaaggagac
ttgttggcctctggctctgatgaccagcataccattgtgtgggatcctctgcaccacaag
aaactcctttctatgcacacaggacacactgcaaacatcttttctgtcaagttcttgccg
cactcaggggatcggatcctcatcacgggagctgcggattccaaggtgcacgtccatgac
ttgactgtcaaggagaccgtgcacatgtttggagatcacaccaacagagtgaagcggatt
gccacggctcccatgtggccaaacaccttctggagtgcagcagaagatggcttaatcagg
cagtacgacctgcgggagaacagcaaacgttccgaggtgctgatagacctgactgagtac
tgtgggcagctggtggaggccaagtgcctgacagtgaacccccaggacaacaattacctg
gccgtgggggccagcgggccctttgtgcgcctctacgacatccgcatgatccacaaccac
aggaaaagcatgaagcagagtccctcagctggagtgcacacgttctgtgaccggcagaag
cccctcccggacggggcggctcagtactacgtggcagggcacctcccagtgaagcttcca
gactacaacaaccggctgagggtcctggtggccacgtacgtcaccttcagccccgatggc
accgagctcctggtcaacatgggaggggagcaggtctatttgtttgatctgacatacaaa
cagcgaccatacacttttctcctcccaaagaagtgccacacttcaggggaagtgcagaat
ggaaaaacctctaccaatggagtgtccaatgggatccatctccacagcaatggcttccgc
ttggccgagggaagggcacacgtgagcccccaggtggagttgcccccgtacctggagagg
atcaagcaacaagccaacgaggcctttgcctgccagctgtggacgcaggccatccagctg
tacagcaaagctgtgcagaaggcccccaacaatgccatgctctatgggaacagagctgct
gcctacatgaagcgcaagtgggatggggaccattacgatgctctgagggactgcttgaag
gccatatccctaaatccatgccacctgaaggcccacttccgcctcgcccgctgtctcttt
gaactcaagtacgtggcagaagcactggagtgtctggatgactttaaagggaagtttcca
gaacaagcacacagcagtgcctgcgacgcactagacagggacatcaatgctgccctcttc
tccaagagtgataacgctgaggacaagaaggggggtggccccatccggctgcgagccacg
ggccgcaaggactccatctctgaggacgagatggtgctgagggagcgcagctacgactac
aagttccggtactgcggccactgcaacaccaccacggacatcaaagaggccaatttcttt
ggcagcaacgcccagtacatcgtcagcggctcggacgacggctccttcttcatctgggag
aaggaaaccaccaacctggtgcgtgtgctgcagggagacgagtccattgtgaactgtctc
cagcctcatcccagctactgcttcctggccaccagcggcatcgacccagtcgtgcgactc
tggaaccccaggccggagagcgagaccctcaacggccgcgtggtcgtggacatggaaggt
gcttcccaagccaaccagcggcggatgaacgcggacccgctggaggtgatgttgctgaac
atgggctaccggatcacaggactgaccagtggtggggctggcggctcagatgatgaagac
agctcagaggggcaggtccagtgccggcccagctaa
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