Taeniopygia guttata (zebra finch): 100223907
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Entry
100223907 CDS
T01082
Symbol
NID2
Name
(RefSeq) nidogen-2 isoform X1
KO
K06826
nidogen (entactin)
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100223907 (NID2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
100223907 (NID2)
Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
100223907 (NID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
Thyroglobulin_1
Ldl_recept_b
EGF_3
EGF_CA
cEGF
EGF
hEGF
SGL
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
100223907
NCBI-ProteinID:
XP_030129059
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All DBs
Position
5:59551503..59568495
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AA seq
1337 aa
AA seq
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MRALAAVLAAVLAVGTALPRPGLLPHGPARGDARLRPGDDESSPGLLLRRALRLYGRAAR
RLYVGTNGVISTQDFPRETQYVDDDFPTDFPVVAPFLADLDTSGDRGNIYYRQDDSRDVL
DQAVGYIRAGFPRSAGAFVPTNAFIATWEEVGAYQELSQDTEPSRKLNTFQAVIAYNDED
TYTIFLYPDGGLQFLGTRPKESYNVQLELPARVGFSWGDSDDPKRDGLFHSLASSEQALR
NLERESNTGIPGVWVFHVGSTEHVEPGGGEGAAPAEHPNPGTTGHPHPLSSHTSMAQRPS
HGSHSPVLLGFVPGRRDTQEQSRWLQSRGDGGTGQSFSANPSSYSSGQHGVGVEEDVHFN
PDVFTYSAASKETCAQHHGRCSPHAFCTDYAAGFCCHCRATFYGNGRQCLPEGAVHRLNG
KVSGSLRVGRASVGFQDVDLHAYIVGSDGRAYTAISGVPQPAARALLPLLPVGGLFAWLF
ALEEPGSENGFSITGAEFTQSLEVTFYPGGETVQVTQTAEGLGPDNYLNLRTHIQGEVPF
LPDNVTVHITPYEELYSYSSSAVTSSGQREYVVAAGTANRTVSYRLRQNITFSGCPHSRP
PARQRLSVGRAFALFDNHEHVLRYALAARIGPARGDAANPVVSPCQDGSHTCQAPARCQP
GVGTEYTCECAAGYRPDGHGCRDVDECAEGLSQCGPFSECRNVPGSYRCECRGGYGPAGD
GQACVPLAPAGDPCEDGRHPCAPGDRARCLSRGDGRATCECLPGYSGDGIHCSDVDECAE
SPCHPAAICYNTPGSFSCRCRPGYAGDGFQCTYAAEGNPQRLTPCQHERMYPREVPPLGD
GHAPQCDEQGRYRPLQCHGSSGHCWCVDAAGQEIAGTRTAPGTTPPRCGSPESIQQLTPC
EHARMYPREVPPGPSPVGDGHVPQCDEQGRYRPLQCHSSSGHCWCVDSAGQEIAGTRTAP
GTTPPRCGSPEPTERPPSMCERWRQSLLEHYGGSPRGDQYVPQCDPSGDFTPLQCHGDSG
YCWCVEQSGREIPGTRSEPGTTPPCLPSVAPPSVRPEPRPDVSPPATGTFLLYAQGQQIG
YLPLNGTRLHKEAAKTLLSLHGSIVVGIDYDCRERMIYWTDVAGRTISRAGLEPGSEPET
LISSAGLISPEGLAVDHLRRAMFWTDSGLDRIERARLDGSERRVLFHSELVNPRAIAVDP
VRGNLYWTDWNREAPKIETSTVNGANRRVLVHSDIGLPNGLTFDPFSKLLCWADAGTKHL
ECTFPDGSGRRVIQSNLNYPFSIVSYANHFYHTDWRRDGVIAVNKETGSFTDEYLPEQRS
HLYGITAVYPYCPGARK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgctggcggcggtgctggcggcggtgctggcggtggggacagccctgccccgc
ccggggctgctcccgcacggcccggcccgcggcgatgcccggctccggcccggagacgac
gagagctccccggggctgctgctccgccgcgccctccgcctctacggccgcgccgcccgc
cgcctctacgtggggaccaacggggtcatctccacccaggatttccccagggagacccag
tacgtggatgacgatttccccacagacttcccagtggtcgcccccttcctggccgacctg
gacacctccggggacagagggaacatctactatcggcaggatgactctcgggacgtgctg
gaccaggctgtgggatacatccgggccgggtttccccgctctgccggcgccttcgtgccc
accaatgccttcattgccacctgggaggaggtgggcgcctaccaggagctttcccaggac
accgagccctccaggaagctcaacaccttccaggcagtcatagcctacaacgatgaggac
acctacaccatctttctctaccccgacggtggcctccagttcctggggacacgacccaag
gagtcctacaacgtccagctggagctgccagcccgggtgggcttcagctggggggacagc
gatgacccgaagagggacgggctcttccacagcctggccagcagcgagcaggctctgagg
aacctggagagggagagcaacacgggcatccctggcgtgtgggttttccacgtgggcagc
acggagcacgtggagccggggggtggcgagggagctgctcctgctgagcaccccaaccct
ggcaccaccggccacccccaccctctgtccagccacacatccatggcccagcgtcccagc
cacggatcccacagcccggtgctcctgggctttgtccccgggaggagggacacgcaggag
cagagccgctggctgcagtccagaggggacggtggcactgggcagagcttctctgccaac
ccctcctcctacagctcgggccagcacggcgtgggcgtggaggaggacgtgcatttcaac
cccgacgtgttcacctacagcgcagccagcaaggagacgtgtgcccagcaccacgggcgc
tgctcccctcacgccttctgcaccgactacgccgccggtttctgctgccactgccgggcc
accttctacgggaacgggcggcagtgcctgcccgaaggggccgtgcatcgcctcaacggg
aaggtgagcgggagcctgagggtgggacgggcgtccgtcggcttccaggacgtggacctg
cacgcctacatcgtgggcagcgacggcagagcctacacggccatcagcggggtgccccag
cccgctgcccgcgccctgctgcccctgctgcccgtcggggggctcttcgcgtggctcttc
gccctggaggagcccggctctgagaatggcttcagcatcaccggtgctgaattcacccag
agcctggaggtgacgttttaccccggtggggagacggtccaggtcactcagacagccgag
ggcctggggccggacaattatttaaacctcaggacacacatccagggtgaggtgccattc
ctgccagacaacgtcaccgtccacatcactccctacgaggaactctactcctactccagc
tcggccgtgacatcctcaggccagcgggaatacgtggtggccgcgggcaccgccaaccgg
accgtgtcctaccgcctgcgccagaacatcaccttctcggggtgcccgcactcgcggccg
ccggcgcggcagcggctctcggtgggacgcgccttcgccctctttgacaaccacgagcac
gtcctgcgctacgccctggccgcccgcatcggcccagcacgaggcgatgccgcgaatccc
gtggtgagcccgtgccaggatggctcccacacgtgccaggcaccggcgcgctgccagccc
ggcgtgggcacggagtacacgtgcgagtgcgccgccggctaccgcccagatggacacggc
tgcagagatgtggacgagtgtgccgagggcctgagccagtgcgggcccttctccgagtgc
cggaacgtgccgggcagttaccgctgcgagtgccgcggcgggtacgggccggcgggggac
gggcaggcgtgtgtgccgctggcaccggcgggtgacccctgcgaggacgggcggcacccc
tgcgctccgggggaccgggcgcggtgcctgtcccgcggtgacggccgcgccacctgcgag
tgcctccccggctactccggcgatggaatccactgctccgacgtggatgagtgtgctgaa
agcccgtgtcacccggctgccatctgctacaacaccccgggctccttctcctgccgctgc
cggcccggctacgcgggcgacggcttccagtgcacgtacgcggcagaagggaacccgcag
cgcctcacgccctgccagcacgagcggatgtacccgcgggaggtgccacccctgggcgac
ggccacgcgccccagtgtgacgagcagggccggtaccggcccctgcagtgccacggcagc
tccgggcactgctggtgcgtggacgccgccgggcaggagatcgccggcacccgcacggcg
ccgggcaccaccccaccacgctgcgggagcccagagtccatccagcagctgacgccctgc
gagcacgcacggatgtacccacgggaggtgccaccaggaccgtcacccgtgggtgatggc
cacgtgccccagtgcgacgagcagggccggtaccgacccctgcagtgccacagcagctcc
gggcactgctggtgcgtggacagcgccgggcaggagatcgccggcacccggacggcaccg
ggcaccacccccccacgctgcgggagcccagagcccacagagcgtccccccagcatgtgc
gagcgctggcggcagagtttgctggagcactacgggggcagcccccgcggggaccagtac
gtgccccagtgtgaccccagcggggacttcaccccgctgcagtgccacggggacagcggc
tactgctggtgcgtggagcagagcggcagggagatcccggggacgcgctccgagcccggc
accaccccgccctgtctgcccagcgtcgccccgcccagcgtccggcccgagccccggccc
gacgtgtccccaccggccacggggacgttcctgctctacgcccagggccagcagatcggc
tacctgcccctgaacggcacccggctgcacaaggaggcggccaagaccctgctctccctg
catggctccatcgtggtggggattgactatgactgccgggagaggatgatctactggact
gacgtggctggacggaccatcagccgggcagggctggagccaggctctgagccagagacc
ctcatcagctcagcagggttgatcagccccgagggtctggccgtggaccacctgcgccgg
gccatgttctggacggacagcgggctggacaggatcgagcgggcccggctggacggctcc
gagcgccgcgtgctcttccacagcgagctcgtcaacccccgcgccatcgccgtcgatcct
gtccgaggcaacctttactggacggactggaatcgtgaagctcccaaaatcgaaacttcc
actgtcaatggagccaacaggagggttctggtgcactcagacattggtttgcccaatggc
ctgacttttgaccccttctccaagctgctgtgctgggcagacgcaggcaccaagcacctg
gaatgcacattcccagacggcagcggccggcgcgtcatccagagcaacctcaactacccc
ttcagcatcgtcagctacgccaaccacttctaccacaccgactggagacgggatggggtg
atagctgtaaataaagaaactggctctttcactgatgagtatcttccagagcagcgatcc
cacctctatggaatcacagcagtttatccctactgccctggagccaggaaatag
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