Taeniopygia guttata (zebra finch): 100223918
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Entry
100223918 CDS
T01082
Symbol
SNX5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100223918 (SNX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100223918 (SNX5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
100223918 (SNX5)
Membrane trafficking [BR:
tgu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
100223918 (SNX5)
Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100223918 (SNX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Motif
Other DBs
NCBI-GeneID:
100223918
NCBI-ProteinID:
XP_002198957
Ensembl:
ENSTGUG00000005916
UniProt:
H0Z6C1
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Position
3:complement(88704098..88719156)
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AA seq
397 aa
AA seq
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MALLRGDAQDKLRSVSVDLNVDPSLQIDIPDALSEKDRVKFTVHTKTTLPAFQSPEFSVT
RQHEDFVWLHDTLTETEEYAGLIIPPAPSKPDFDGPREKMQKLGEGEVSMTKEEFAKMKQ
ELEAEYLAVFKKTVSSHEIFLQRIASHPVLSKDRNFHVFLEYDQDLSVRRKNTKEMFGGF
LKSVVKSADEVLFSGVKEVEDFFEQEKTFLVNYYNRIKDACAKADKMTRSHKNVADDYIY
TSACLNSLALEEPTVIKKYLLKVAELFEKLRKVESRVSSDEDLKLSELLRYYMLNIEAAK
DLLYRRTRALVDYENSNKALDKARLKSKDVRLAEAHQQDCCQKFEKISESAKQELMSFKQ
KRIAAFRKNLIEMAELEIKHAKNNVSLLQSCIDLFKN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctccgtggggacgcgcaggacaagctgagatctgtttctgtagacctgaat
gttgatccttctctccaaattgatatccctgatgccctaagtgaaaaggacagagtgaag
ttcactgtgcacactaagactacactgccagcttttcaaagccctgagttttcagttaca
aggcagcacgaagactttgtgtggttacatgatacactcactgaaactgaagagtatgca
ggactcattatacctccagcaccttcaaagcctgactttgatggtcccagagagaagatg
cagaagctgggggaaggagaagtgtccatgacaaaagaagagtttgccaaaatgaagcaa
gagctggaagctgaatacctcgctgttttcaagaagaccgtttcatcacatgagatcttc
ctgcagcggattgcttctcatcctgtgctcagtaaagatcgcaatttccatgttttcctg
gagtatgaccaagatctgagtgttcggaggaaaaacactaaagagatgtttggtggtttt
ttaaaaagtgtagtaaagagtgctgatgaggtcctcttctctggagtcaaggaagtagaa
gatttttttgagcaagagaagactttccttgtgaactactacaacagaatcaaggatgca
tgtgcaaaagcagataagatgacaagatctcataaaaatgttgcagatgactatatttat
acttcagcttgtttgaacagcctggcattagaagagcctacagttatcaaaaaatacttg
ttgaaagttgcagagctctttgagaaactcaggaaggtagagagtagagtttcatctgat
gaagacttaaagctctctgaactactgagatactacatgctcaatatagaagctgctaag
gatctcctgtacagacgaaccagggctcttgttgactatgagaactcgaacaaagctcta
gacaaagccagactaaagagcaaggatgtcaggctggctgaggcacatcaacaggattgc
tgtcagaagtttgaaaagatttcagaatctgctaaacaagaactgatgagcttcaaacag
aagagaatagcagcatttcgtaaaaacttaattgaaatggcagaactggaaataaaacat
gcaaagaacaatgtgtctctcctgcagagctgtattgacttgttcaagaactga
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