Taeniopygia guttata (zebra finch): 100223935
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Entry
100223935 CDS
T01082
Symbol
SPOCK1
Name
(RefSeq) testican-1 isoform X1
KO
K08136
testican
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgu00535
]
100223935 (SPOCK1)
Proteoglycans [BR:
tgu00535
]
Extracellular matrix (ECM) proteoglycans
Others
100223935 (SPOCK1)
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
100223935
NCBI-ProteinID:
XP_002187206
Ensembl:
ENSTGUG00000001204
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Position
13:10112783..10381128
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AA seq
438 aa
AA seq
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MSGVLVIAAWCFLQVESRHPEIITSNSNHGNFLDNDKWLSTVSQYDKDKYWNKFRDEVED
DYFRNWNPNKPFDQALDPSKDPCLKVKCSPHKVCVTHDYETAICVSRKQLVHSLRQKKGN
LAQKHWAGAANVAKCKPCPVAHSSAVCGSDGHTYSSQCKMEFHACTSGKTITTQCEGPCP
CLPGPESLKHKTEKTACTDKELRSLASRLKDWFGALHEDANRVIKPTSSETAQGRFDTSI
LPICKDSLGWMFNKLDMNYDLLLDPSEISAIYLDKYEPCVKPLFNSCDSFKDGKLSNNEW
CYCFQKPGGLPCQNEMNRIQKLSRGKILFGVFIPRCNEEGYYKATQCHDSTGQCWCVDKY
GNEIAGSRKRGTVSCEEEQETSGDFGSGGSVVLLDDLEEEPEATKKDKEGKLKIHVRAAN
EDDEDEDDDKDDEIGYIW
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggtgctggtgatcgctgcctggtgcttcctgcaagtggagagccggcatccc
gaaatcatcacgagtaacagcaaccatggcaatttcctggacaacgacaaatggctgagc
accgtttcgcagtacgataaagacaagtattggaacaaattccgggatgaagttgaggat
gattatttcagaaactggaatccaaacaagccatttgatcaagcccttgatccatccaaa
gacccctgcctgaaggtgaagtgcagcccacacaaagtgtgcgtcacccacgactacgag
actgcgatttgtgtgagccgcaagcagctggtgcacagccttcgacaaaagaaaggcaac
ttggcccagaagcactgggctggagcagccaacgtggcaaagtgcaaaccctgtcccgtg
gcccattccagcgctgtctgcggctctgacggacacacctacagcagccagtgcaaaatg
gagttccatgcatgtacttctggcaaaaccatcacaactcaatgtgaagggccctgcccc
tgcctgccgggacctgaaagtttaaaacacaagacggagaagactgcttgcacagacaaa
gagctgaggagcctggcctcgaggctgaaggactggttcggtgccctccacgaggatgcc
aatcgtgtcatcaaacccacgagctcggagacagcacaaggcagatttgacaccagcatc
ctcccaatctgcaaggattccttaggctggatgttcaacaaacttgacatgaactacgac
ctgctgctggatccctcagagatcagtgccatttacctggataagtacgagccatgtgtc
aagccactcttcaactcctgcgactccttcaaagacgggaagctttccaacaacgagtgg
tgctactgcttccagaagccaggcggtcttccttgccagaatgaaatgaatagaattcaa
aagctaagtagagggaagattctgttcggtgttttcatcccccggtgcaatgaggaaggt
tattacaaagccacgcagtgccacgacagcacggggcagtgctggtgtgttgataagtat
gggaatgagatagctggctccagaaagcgaggcacagtcagctgtgaagaagagcaagaa
acctcaggggattttggcagtggtggatctgttgtattgttggatgatttggaagaggaa
cctgaagcaacaaaaaaagacaaagaagggaaactgaagattcatgtaagagcagctaat
gaagatgatgaagatgaagatgatgataaggatgatgaaattggttatatatggtag
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