KEGG   Taeniopygia guttata (zebra finch): 100223938
Entry
100223938         CDS       T01082                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100223938 (HELQ)
Enzymes [BR:tgu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100223938 (HELQ)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    100223938 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DUF3135 HTH_41
Other DBs
NCBI-GeneID: 100223938
NCBI-ProteinID: XP_012428739
Ensembl: ENSTGUG00000002154
UniProt: H0YVB4
LinkDB
Position
4:complement(61230463..61248149)
AA seq 1050 aa
MAEPKLAVRRKSRSSKRSRAPVQPVAASSPVARKRPSSDGEGPPAEEPCDNDSEEDMFGD
YDSFYGNDSLIAQVADIEHKYLQDKNIDVKTAGEIVLGNLQSGVHQKEQDNFSASQNVVV
LKSDKESACQRCDSDPADGNHELMESTLDDLPSSQLLCFEKMDELSSASRTSPISKGRDE
CVNSFSHKIRDPLSFYPGAEHRNRPTDTSSDSKCVLFKSESLKDHLKNAMTGNARAQTLQ
VSKTKQLKEAVLSEEIFVARKAIESSSLDIGPFYGLPSKVKDLFRQLRGIETLYEWQHDC
LMLESLQQRKNLIYSLPTSGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRGLSS
FGIELGFLVEEYAGSKGRFPPIKRRVKKSLYIATIEKGHALVNSLIETERICDLGLVVVD
ELHMLGAGSRGAVLEITLAKILYTSKKTQIIGMSATLNNVGDLQKFLQAEYYTNNFRPVE
LKEYIKIRDTIYAVDSKTQNGFAFSRLLNFKYSSNLEKADPDHIIALVTEVIPKYSCLIF
CPTKKNCENVASMVCKYLKKEFRAHKEKEKQDLIKNLKSIGNGTVCPVLKQTIPFGIAYH
HSGLTNDERKVIEEAYSAGILCLLACTATLAAGVNLPARRVILRAPYVGNDFLKKSQYKQ
MTGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPLENCYSNLLLELTKGIQSLLLSLVG
LKIAVTHKEVDNFMCCTLLGVQQQLLSKEKSFSEIIKDGLENLIEKGLLKGRISEKDHNS
KSTLTITPLGKATYKGSIDLAYCNILYRELKKGLEGLVLESSLHLLYLSTPYDMTSTCSP
DWMIYLRQFHQLSAAEQKVADIVGVPESFITKMASGQTIRKNVDHAVVNRFYLTFVLYTL
LKETNIWSVSEKFNLSRGYVQNLLNSAASFASCLLHFCEELEEFWVYKALLTELTKQLTY
CVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLAYANPETLVRMIEHLSRRQAKQIISS
AKMLLSEKTEALQEEVEELLKVPTDIPGTH
NT seq 3153 nt   +upstreamnt  +downstreamnt
atggcggagcccaagctcgccgtgcgcaggaagagccgctccagcaagcggagccgggcc
ccagtgcagcccgtcgccgccagctcgccggtggctcgcaagaggccgagttctgatggc
gaagggcccccggcggaggagccgtgcgataacgatagcgaggaggatatgtttggtgac
tatgacagcttttatggaaacgattcattgatagctcaagtggctgatattgaacacaaa
tacctgcaggataaaaatatagatgtgaaaacagctggagagatcgtacttgggaacctt
cagtcaggagttcaccagaaggagcaagataacttctctgcttcacaaaatgtggttgtc
ctcaaaagtgataaagagagtgcctgccaaaggtgtgacagtgacccagctgatggcaat
catgaattaatggagtctactttagatgacttgccatcctcgcaacttctgtgttttgaa
aaaatggatgaactttcttctgcttctagaacatctccaatctcaaaagggagggatgaa
tgtgtgaattctttctcacacaaaatcagagacccattgtctttttatcctggtgctgaa
cacaggaacagacctactgacacttcctcagactccaagtgtgttttatttaaatctgag
agtctcaaagatcacctaaaaaatgctatgactggaaatgccagagcccagactctgcag
gtctccaagaccaagcagctcaaagaagctgttttatctgaagagatttttgtggctagg
aaagctattgaatcatcttctcttgatataggccctttttatggattacctagcaaggtt
aaagatttattcagacaacttcgagggattgaaacactttatgagtggcagcatgattgc
ttaatgttagaatccctacagcaaaggaagaacttgatatattcattgccaaccagtggt
ggaaaaactcttgtagctgaaataataattcttcaagaattactctgcaggcagaaggat
gttctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggtttatcaagt
tttgggatagaattgggtttcctggttgaagaatatgcgggaagtaaaggaagatttcca
ccaatcaaaaggagagtaaaaaaatctctttatattgctactatagaaaaaggacatgct
ctggtgaactccttaattgaaacagaaagaatctgtgaccttggcctggttgtggtagat
gagctgcatatgcttggggcaggaagccgtggagcagtactggaaattactctggcaaaa
attctttacaccagtaaaaagacacagatcattggcatgagtgcaacattaaataatgtt
ggagacctgcagaagttcctgcaagcagagtactacactaataattttagaccggtagaa
ttaaaggaatacataaagatacgagacaccatttatgcagttgacagcaaaacacaaaat
ggatttgctttttcacgtctccttaatttcaagtattctagtaatctagagaaagcagat
cctgaccacatcattgcactggttactgaagttattcctaaatattcctgcctaatcttt
tgtcccactaaaaagaattgtgaaaatgtggcttcaatggtgtgcaagtacctcaagaaa
gaatttagagctcacaaggagaaagaaaaacaagatctcatcaagaacctaaagagtatt
ggaaatggaactgtctgtcctgttttgaagcaaacaatcccttttggtattgcttatcac
cacagtggccttacaaatgatgaacgaaaagtcatcgaggaagcttattctgcgggtatc
ctatgtctgcttgcttgcacagccactctagctgctggagtgaacctaccagctagaagg
gtgattctcagagctccttatgttggcaatgacttccttaagaagagccagtataaacaa
atgacgggcagagctggtcgagctggcattgacagtgctggagaaagtattctcatagtg
caagaaaaagacaaacacttggttcaggatttagttcacagtcctttggagaattgctac
agcaatcttctgttggaattgaccaagggaatccagagcctgttgttgtctttggttgga
ctgaagatagcagttacccataaggaagtggacaattttatgtgttgtacattgctgggt
gttcagcagcagctgctgtctaaagagaagagcttctcagaaataattaaagatgggctg
gaaaatctaatagaaaaaggactcctaaaaggaagaatatctgagaaggaccacaattcc
aaatctacactgacaatcacacccttgggtaaagctacatataagggttcaatagacttg
gcgtactgcaatattctgtacagagaattgaaaaagggtttggaggggctggttctcgag
agcagtcttcatctcctatatctgtcaactccctatgatatgacttctacctgtagccca
gattggatgatatacttgagacagttccaccagctaagtgcagcagagcaaaaagtagca
gatattgtgggagtacctgaaagctttattacaaaaatggcttctggtcaaaccatcaga
aagaatgtggaccacgctgtggtgaacaggttctacctgacatttgtgctttatacacta
ctgaaagagaccaatatttggagtgtttcagagaaatttaacttgtcccggggatatgtg
cagaatctcctcaattctgctgcctcctttgcatcctgcctcctacatttctgtgaggaa
ttggaagaattctgggtttataaagccttgctgacagagcttacgaagcagttgacatac
tgtgttaagacagaactcatccctcttatggaggtagcaggggttctagaggcacgagca
aaacagctttacaatgcaggatacaaaactttagcacatttggcttatgcaaatccagaa
actttggtgaggatgattgagcacttgtcacgacgtcaagccaaacaaataatttcatct
gcaaagatgctgctgagtgaaaaaactgaggctttacaggaagaagttgaagaactctta
aaagtgccaacagatatcccagggacccactga

DBGET integrated database retrieval system