Taeniopygia guttata (zebra finch): 100223943
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Entry
100223943 CDS
T01082
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X2
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100223943 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100223943 (RPP40)
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100223943 (RPP40)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
100223943 (RPP40)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
100223943 (RPP40)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
100223943 (RPP40)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
100223943 (RPP40)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
100223943 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100223943
NCBI-ProteinID:
XP_002197953
LinkDB
All DBs
Position
2:complement(62884607..62896779)
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AA seq
456 aa
AA seq
DB search
MHTQPLRGRCPIRAEVAQSPQGPRAPSGHRRWTGHRRQPPPQPRRRHSGSGCAAGAGGRD
LTARPLPGPPRRVWQLPVGGGGRGGGGVRRAGSGMQPAQLGRAPRHLLVCERGHARHPRS
RHAAHVRDHAYSCRVSFLIPECGLLPEVLKSTIADIGDYYLVRSLPIHELVAHEFIDAFV
KKGSCYALTYKTKIDQDNTAALLPNGKLILSVDKDTYEELGLQGRPSRYSGKKVMRYIIT
IDLTDAGFHPESKKHNRVLWALKEKKPLEFDFLMAWYNTGAEGSTLMSYFSKHQIQALRP
KITFSTLRDLQCPVLQSNDLQGKPEESCSTEELFEWLGAVLNQVSLDNKSSSFLSTYCCP
EPNTVVEKAFLCTITGFIIPEKIIQLLEQLCCYFGEPKLAYWLTLTVHGFADSPVSWRES
EHGFHKGGENLYNFVIFRNLDYWLQMAVGAHDDCPP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcacacccagcccctgcggggtcggtgtccgatccgtgccgaggttgctcagagcccg
cagggaccgagagccccgagcggccaccggcgctggacagggcaccggcgacagccgcca
ccgcaaccccgccgccgccacagcggaagcggttgcgccgccggagccggcggacgtgac
ctcacggcacggccccttcccggccctcctcgccgtgtctggcagctcccggtcggcggc
ggaggaagaggaggaggaggagtaaggcgggcgggatccgggatgcagccggcgcagctc
gggcgcgcgccgcggcatctgctggtgtgcgagcgcggccacgcgcgccacccgcgctcg
cggcacgcggcgcacgtgcgggaccacgcctacagctgccgcgtgtcttttttgatcccg
gaatgtggcctgctacctgaagtgctgaaaagcacaattgcagatattggagattactac
ctggtgaggagtttacccattcatgaattggtcgctcatgaattcattgatgctttcgtg
aagaaaggttcatgctacgcacttacctataagacaaaaattgatcaagataatactgca
gctctgctgccaaatggtaaactaattctgtcagtggataaggatacttatgaggaactt
ggactgcaaggtcgcccttctcggtattcaggcaaaaaagtaatgcgatatattatcact
attgacttgactgatgctggctttcaccctgagagcaagaaacataacagagtgctttgg
gccttgaaagaaaagaaaccattagaatttgacttcctaatggcttggtataatacaggt
gcagagggatcaacattgatgtcatacttttcaaaacaccaaatacaggccctgaggcca
aaaataacattcagcaccttaagggacttgcagtgtccagtgttacaaagtaatgatcta
caaggaaaaccagaggagtcctgcagtacagaggagctctttgaatggctgggtgctgtc
ttgaatcaagttagcttagacaacaaatcctccagcttcttatccacctattgctgccct
gagcccaacacagtagtggaaaaagcttttttgtgcacaatcacaggctttataattcct
gagaagattattcagttattggagcagctgtgttgctattttggtgaaccaaaactggca
tattggctgaccttaactgtgcatggctttgcagacagccctgtgtcctggagagaaagt
gaacatggttttcacaaaggaggagagaacttgtacaactttgtcatttttagaaatctg
gactattggcttcagatggctgtaggagctcatgatgattgtcctccataa
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