Taeniopygia guttata (zebra finch): 100223971
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Entry
100223971 CDS
T01082
Symbol
PSEN1
Name
(RefSeq) presenilin-1 isoform X3
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04310
Wnt signaling pathway
tgu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100223971 (PSEN1)
04330 Notch signaling pathway
100223971 (PSEN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100223971 (PSEN1)
Peptidases and inhibitors [BR:
tgu01002
]
Aspartic peptidases
Family A22: presenilin family
100223971 (PSEN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6559
DUF5523
Motif
Other DBs
NCBI-GeneID:
100223971
NCBI-ProteinID:
XP_002200426
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Position
5:complement(26717912..26743269)
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AA seq
480 aa
AA seq
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MTELSAHLPQFQHGQLTENFPDTHLSNTQESMASALFNTDQNDNSERRRHDNSERRRNDN
AESETNGQPQSNVQQVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFY
TRKDGQLIYTPFTEDTETVGQRALNSILNAAIMISVIIVMTILLVVLYKYRCYKVIHGWL
IISSLLLLFFFSFIYLGEVFKTYNVAMDYITVALMIWNFGVVGMICIHWKGPLRLQQAYL
IMISALMALVFIKYLPEWTAWLILAVISVYDLIAVLCPKGPLRMLVETAQERNETLFPAL
IYSSTMIWLVNMAEEDPEAQRKSKNSTSDKQAPASRTQNEDAEADDGGFSQEWQQQRDNR
IGPIESTPESRAAVQALPSNSQTSEDPEERGVKLGLGDFIFYSVLVGKASATASGDWNTT
LACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDNLVQPFMDQLAFHQFYI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctgtctgcacatttaccccagtttcagcatgggcagctgacagaaaacttc
cccgatacccacctcagcaacacccaagagtccatggcctctgctctgtttaatactgat
cagaatgacaacagtgaaagacgtcgccatgataatagtgagcgcagaagaaatgacaat
gctgagtctgagactaatgggcagccacaaagcaacgttcagcaggtggtggagcaagat
gaagaagaagatgaagagctaacactgaaatatggggcaaaacatgtgattatgctgttt
gtgcctgtcacgctttgcatggtggttgttgttgcaactatcaagtctgtcagcttttat
acacgcaaggatggacagctcatctacactcctttcacagaagacacagagacagtagga
cagagagccctgaattctattcttaatgcagccatcatgatcagcgttatcattgtcatg
accatcctcctggttgtgctttacaaatacaggtgctacaaggtgatccatggttggctt
atcatttcttctcttttgctgcttttctttttctcattcatctacctgggtgaggttttt
aagacatataatgttgccatggactacattacggtggcactcatgatctggaactttggt
gttgtgggaatgatttgtatccattggaagggtcctcttcggctccagcaggcatatctc
attatgataagtgctctcatggccttggtgttcattaagtaccttcctgaatggactgca
tggcttatcctggctgtcatttcagtgtatgatttgattgctgtcctgtgtcctaaaggt
cctcttcgtatgttagttgaaacagctcaagagagaaatgaaactctgtttccagcactt
atttactcctcaacaatgatatggcttgtgaacatggctgaggaagatccagaagcccaa
cggaagtccaaaaactccacttctgataaacaagctccggcaagccggacccagaatgaa
gatgctgaagcagatgatggtggctttagtcaggaatggcagcaacaaagggacaacaga
ataggacccattgaatcaacacctgagtcgcgtgctgctgttcaggctctacccagtaac
tctcaaacaagtgaagaccctgaagaacgaggagtaaagcttggtttaggagacttcatt
ttctacagtgtcctcgttggcaaagcctctgcaacagcaagtggtgactggaatacaact
ttagcatgttttgtagccatattaattggtttgtgccttacacttctgcttcttgccatc
tttaagaaggccttaccagctcttccaatctccataacctttgggctagttttttacttt
gctacagataacttggtgcaaccatttatggaccagctagcattccatcaattttatatc
tag
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