Taeniopygia guttata (zebra finch): 100224024
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Entry
100224024 CDS
T01082
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100224024 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
100224024 (SNX27)
Membrane trafficking [BR:
tgu04131
]
Protein recycling
Others
Others
100224024 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
tgu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100224024 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
RA_3
Motif
Other DBs
NCBI-GeneID:
100224024
NCBI-ProteinID:
XP_032608781
UniProt:
H0Z1V1
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All DBs
Position
25:complement(1602277..1618000)
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AA seq
524 aa
AA seq
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MADEEGEARPGARNGAGEGPPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAP
LQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELVLTVLSVPP
HEAESLEPPEEPLGPPFYDYSEKQAVPISIPTYKHVEQSGEKFVVYNVYMAGRQLCSKRY
REFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDI
MQEFLSESDENYNGVSDVELRVALPDVTTVTVRVKKNSTTDQVYQAVAAKVGMDSVTANY
FALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTLRKWLFTTEEEALLNDNDLAV
AYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEITFPHCSCDSR
RKGHVISAISIRHFKLHACTEEGQLENQVIAFEWEEMQRWDTDEEGMAFCFEYARAEKKP
RWVKIFTPYFNYMHECFERVFCELKWRKENLFQLVRSQQRDAAT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggcgaagcgcggccgggggcgcggaacggagccggggagggaccc
ccgggcgggccccgcgtcgtccgcatcgtcaagtccgagtccggttacggctttaacgtc
cgcgggcaagtgagcgaaggcgggcagctgcgcagcatcaacggcgagctgtacgcgccg
ctgcagcacgtcagcgccgtgctgggcggaggggccgccgaccgcgccggggtgcgcaag
ggggatcgcatcctggaggtgaacggggtgaacgtggaaggagccacacacaagcaggtg
gtggatctgatccgcgctggtgagaaggagctggtgctgacggtgctgtcggtgccgccg
cacgaggccgagagcctggagccgcccgaggagccgctggggccgcccttctacgactat
agcgagaagcaggcggtgcccatctccatccccacctacaaacacgtggagcagagcggg
gagaagttcgtggtgtacaacgtttacatggccgggaggcagctgtgctccaagcgctac
cgggaattcgccatcctgcaccagaacctgaagcgggaattcgccaacttcaccttcccg
cgcctgcccggcaagtggccgttctccctgtccgagcagcagctggacgcccgcaggagg
ggcctggaggagtacctggagaaggtgtgctccatccgggtcatcggcgagagcgacatc
atgcaggagttcctgtcggagtcggacgagaattacaacggcgtctccgacgtggagctg
cgggtggcgctcccggatgtcaccacggtgacggtgagggtgaagaagaacagcaccacg
gaccaggtgtaccaggcggtggctgccaaggtgggcatggacagcgtcaccgccaactac
ttcgccctcttcgaggtcatcaaccactccttcgtgcggaagttggctcccaacgagttc
ccccacaagctctacgtgcagaattacacctcggccgtgccggggacgtgcctgaccctg
cgcaagtggctcttcaccaccgaggaggaggcgctgctcaacgacaacgacctggccgtg
gcctacttcttccaccaggccgttgatgacgtcaagaaaggctacatcaaagccgaggag
aaatcctaccagctccagaagctctgcgagcagaggaagatggtcatgtacctgaacatg
ctgcggacgtgcgagggctacaacgagatcaccttcccgcactgctcgtgcgactcgcgg
cgcaagggccacgtcatctctgccatcagcatccgccacttcaaactgcacgcctgcacc
gaggaggggcagctggagaaccaggtgatcgccttcgagtgggaggagatgcagcgctgg
gacacggacgaggagggcatggccttctgcttcgagtacgcgcgcgccgagaagaaaccg
cgctgggtcaagatcttcaccccctacttcaattacatgcacgagtgcttcgagcgagtc
ttctgcgagctcaagtggaggaaggagaaccttttccagctggtcaggtcacagcaaagg
gacgcggccacttaa
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