Taeniopygia guttata (zebra finch): 100224111
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Entry
100224111 CDS
T01082
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100224111 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100224111 (RAB11FIP1)
Membrane trafficking [BR:
tgu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100224111 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
100224111
NCBI-ProteinID:
XP_030146008
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All DBs
Position
22:694232..707414
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AA seq
1372 aa
AA seq
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MAGPAPGWAPTHVRVTVLRARGLRAKAAAGGSDAYAVMALGRDKFRTSVAERCRGEPLWR
EEATFELPPRPAALRLTVLHRALAGADKFLGRAEVELAALRDGGGPRHTRWYKLRSKPGK
KEKERGEIEVDIQFMRSNMTASMFDLSMKDKPRSPFGKLKDKLKGKRSSGLSDTASEIVP
STSHSPADSEDEAVEKEKKKSKFKALFSKPGLQKTSLSQSMSVLPTQQPLTQRVRLRPSD
FQAQWDEEEPETSPASERSFESVPDLKPAPSPLFKSRKPAFLDSRQLTQGTTNHTKKDGL
SLFTGLKSKSDPMSKSSLCINGSHIYMEETTTKDKTPTSSPSPHNLRRKQLFASEENLSS
RSTKSPEEMGKTSSGQAFSGSTSLETFKSMTLPSYKLLSSEEHLDTSVPPSMEAVRETKK
PDHKKPALLSLVTGKKETVKPSDAEIIPDRTLQSEGTIPEEKREEEAKCPEAPADLGRRS
PSGDAQHAEEAVTTKQQLGPCEEERKPEKAAPAKTKAVKPRLGLSPEEEPKATLPTLAPD
PLPAFLSVHRISSANNPFVSEVGQPVQVPDSENITSTPASLTSPALAAELWNDKNPFTPE
WDRASRALDPSSITHFPSSHHPAASVPKVPLPGQVSARGNNPFAADWGQGPEGSEASWGV
SGPRTPSVPSDCPFNDTNPFVSKRGGQAAPASQTGSSPCCLPGGEDCSSAGHPARGAAGG
SADVALAVPDPLGTLSHPPSGPPGLAPEPRRDSARLQPEDSLESSKPGRGKYVSFVPGEW
QGVPSGDVGLGGQEGGEQPLDSSGRLQVGSGAAGERAEFVCELGAGGDPWTELSGDSTHR
TWNSDGAAVEVTGVSTEPCTRGDKGFVSLSECSDSLVPEADQAPSPRSELRKEQETCGGK
QRAECVPVVEPQAPPPAGNEPLSQVQPVPRACTVSPGEGEPGRAGSEVPVPPKPAPRLAV
LLRKPPATPQAELRADVPASGDGAQSTPGLPFPETSAARGCLPQGGLLGTVTPAVTPRGK
SSGMPLEKEGGDLSVSLTNVRSAIPVPGDRGSAPAGLPVILEGGSDDELLGDCQDSCGAT
AGGRGVLGNGEQPRGLTPLHGEQRELSDSSAAALGGGAGAIPGACEPRSLAVLPAAVGAP
RVCVQGADSGLGVTSHSRECDSHFGKQELESSVGVEERAECDFSEPSAFSSSLSSPCQPH
SSSHSLLSDTPSRRAESPKKPTAEGFADKAGNSGKKKLLQARVSPSETFPNQSPRGAETV
SPQHRLHPVKPMNAMANKPQSKNLNVISTMNEKLLEMSVKKYDPSDPAYAYAQLTHDELI
QLVLKQKDTITRKDLQVRELEDYIDNLLVRVMEETPNILRVSMSGNRKAGKM
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccggccccgggctgggcgcccacccacgtgcgggtgacggtgctgcgggcg
cggggactgcgcgccaaggcggcggcgggcggcagcgacgcgtacgcggtgatggcgctg
ggccgcgacaagttccgcacgtcggtggccgagcggtgccggggggagccgctgtggcgg
gaggaggccacgttcgagctgccgccgcggcccgccgcgctgcgcctcacggtgctgcac
cgcgccctggccggcgccgacaagttcctgggccgcgctgaggtggagctggcggcgctg
agggacggcggcggcccgcggcacaccaggtggtacaagcttcgctccaagccagggaag
aaggaaaaagagagaggggagatcgaggtggatatccagttcatgaggagtaacatgaca
gccagcatgtttgacctgtccatgaaggacaagccccgctctccctttgggaagctcaaa
gacaagctcaagggcaagaggagcagtggcctctcggacacggcgtcggagatcgtcccc
agcacctcccactcccctgctgacagcgaggacgaggctgtggagaaggagaagaagaaa
tccaagttcaaagcgctgttctccaagcctggcctgcagaagacatccctgtcccagtcc
atgtcagtgctgcccactcagcagcccctcacccagagggttcggctgcggcccagtgac
ttccaggcgcagtgggatgaggaggagcccgagacctctcctgcctcagaacgatccttt
gaaagtgtgccggacctgaagccagctccttctcctctgtttaaatctcgtaaaccagcc
tttttggacagtaggcagctaacccaaggaaccactaaccacaccaaaaaggatggcctc
tctttgttcactggccttaaatccaaaagcgatcccatgtccaagtctagtctgtgcatc
aatggcagtcacatctatatggaagagaccacgacgaaggacaagactccaacctcttcc
ccctctcctcacaacctcaggaggaagcagctctttgcttcagaggagaacctatcctcc
aggtccactaaatcacctgaagagatggggaaaacctcttctgggcaggcgttctctggg
tccacatccttggaaaccttcaagtccatgactttgccatcgtacaaactgctcagcagc
gaggagcacctggacaccagcgttccaccaagcatggaggctgttagagagaccaaaaaa
ccagaccacaaaaagcctgccttgctctccctggtcactgggaagaaggaaacggtgaag
cccagcgatgctgagattattcctgacaggaccctgcagagtgagggtacaattccagaa
gagaagagggaagaggaggccaaatgccccgaagccccagcagatctgggcagaaggagc
ccgtcaggagacgctcagcacgcggaggaggctgtcacaaccaagcagcagctcggccct
tgtgaggaggaacggaaacccgagaaagctgcaccagccaagaccaaagctgtgaaaccc
agactgggcctgtctccagaggaggaacccaaagccacgcttcctactcttgcacctgac
cccctccctgcttttctctctgtgcaccgtatcagcagtgccaataatccttttgtttct
gaagtggggcagccagtccaagtgccagactctgaaaacatcactagtactcctgcctct
ctcacttcccctgctttagctgcagagctctggaatgacaagaacccctttactcctgag
tgggacagggcatccagagccctggatcccagcagcatcacccacttcccttcatcccat
catcctgcagcctctgttcccaaagtgcctcttcctgggcaggtctctgccaggggaaat
aatccttttgctgctgactgggggcagggtcctgagggctctgaggcttcctggggtgtc
tctgggccacgcacaccttctgtcccctctgactgtcctttcaatgacacaaatcccttc
gtgtccaagcgtgggggacaggcagcgccagcttcccagactggctcttccccttgctgc
cttcctggtggggaggactgttcctctgcaggacaccctgctcgtggtgctgcagggggc
tctgcagatgtggctctagctgtgccagaccctctgggcaccttgtctcaccccccttct
ggcccccctgggctggctccagagccacgccgggattctgctcggcttcagcctgaggat
tctttggaaagcagcaagccaggccgtgggaaatatgtgtcctttgtccctggggaatgg
cagggtgttccatcaggtgatgtgggtttgggtgggcaggaaggcggagagcaacccctg
gattccagtgggaggttacaggtgggttcaggggcagcaggagagcgagcagagtttgtg
tgtgagctgggagcagggggtgacccatggacagagctctctggggacagcactcatcgc
acctggaacagtgatggagcagctgtggaggtcactggtgtgagcactgagccctgcacg
aggggtgacaaaggctttgtgtctctctctgagtgcagtgacagcctcgtgccagaggct
gaccaggcaccatcccccaggagcgagctcaggaaggagcaggagacctgtggtggaaag
caaagggcagaatgtgtgcccgtggtagagccccaggcacctccacctgctggaaacgag
ccactttctcaagtccagccagtgccgagagcctgcacggtgtcccctggggaaggggag
ccagggagggctggcagcgaggtccctgtgcccccaaagccagccccacgactggctgta
ctgctgaggaagcccccagccactccccaggctgagctaagggctgatgttcctgcatca
ggggatggtgcacaatccaccccagggctcccgttccctgaaacctcagctgctcgtggg
tgcctccctcaagggggcctcctggggactgtcacccctgcagtgacacccagaggtaag
agcagtggcatgcctttagaaaaggaaggtggtgatttatctgtcagtctcacaaatgtc
aggtctgccattcctgttcccggggaccggggctcggcaccggccggtctcccggtgatc
ctggagggaggctctgatgatgagctgctgggggactgccaggacagttgtggggccact
gcaggtggcagaggagttctggggaatggagagcagccccgaggtttgacacctttgcat
ggagagcagagagagctctctgatagctctgctgctgctctgggaggaggagcaggagcc
attcctggtgcctgtgagccgcggagtttggctgtgctgcctgctgcagtgggtgctccc
agggtctgtgtccagggagctgactcaggcttaggtgtgacatctcattccagggagtgt
gacagtcattttgggaaacaagagctggaaagcagtgtaggtgttgaggagcgtgcagag
tgtgatttctctgagccttctgctttctcttcctccctgtcaagtccttgccagccccac
tcttcctctcattcccttctctctgacaccccgagtcgtagagcagagtctccgaaaaag
ccaacagccgagggcttcgcagataaagcgggaaattcgggcaagaagaaacttctccag
gcacgggtttcaccctctgaaacgttccctaaccaatccccacggggtgctgaaaccgtg
tctccccagcacagactccatcctgtgaagccaatgaatgccatggctaacaagcctcag
agcaagaacttgaatgtcatcagcaccatgaatgaaaagctgctggaaatgagtgtgaag
aaatacgatccctcagaccctgcctatgcctatgctcagctgacacacgatgagctgatc
cagctggtgctgaaacagaaggataccattaccaggaaggacctccaggtgcgggagctc
gaggactacatcgacaacctccttgtcagagtcatggaagaaaccccaaacatcctccgt
gtttccatgtctggcaacagaaaagctgggaagatgtga
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