| Entry |
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| Symbol |
CTCF
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| Name |
(RefSeq) transcriptional repressor CTCF isoform X1
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| KO |
| K23195 | transcriptional repressor CTCF |
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| Organism |
tgu Taeniopygia guttata (zebra finch)
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| Brite |
KEGG Orthology (KO) [BR:tgu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:tgu03000]
100224119 (CTCF)
03036 Chromosome and associated proteins [BR:tgu03036]
100224119 (CTCF)
Transcription factors [BR:tgu03000]
Eukaryotic type
Zinc finger
Cys2His2 others
100224119 (CTCF)
Chromosome and associated proteins [BR:tgu03036]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100224119 (CTCF)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:complement(13878755..13912784)
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| AA seq |
750 aa
MKRTNQSRQKCRSAKNINQEGEMEGEAVDAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGSEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVSQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAAAQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
AEEEEEAQPAVVEAPNGDLTPEMILSMMDR |
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| NT seq |
2253 nt +upstreamnt +downstreamnt
atgaagagaacaaatcagtccaggcagaagtgcagaagcgccaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgacgctattgtggaggaatcagaaacgttcataaag
ggaaaagagaggaaaacctatcaaagacgccgtgaaggtgggcaagaggatgatgcctgt
catataccaccaaaccaagcagatggaagtgaagtggtgcaggatgtcagcagtggggtg
cagatggtgatgatggatcagctggatccaactcttcttcaaatgaagaccgaagtaatg
gaaggtgcagtgtctcaggaaactgaggctactgtggatgacacacagatcataacactt
caggttgttaatatggaagagcagcctataaaccttggtgagcttcagctggttcaagta
cctgtaccagtgactgtacctgttgccaccacgtctgtggaagaactgcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaggagggggagcccatgatctgtcacaccctc
cctttaccagaaggcttccaagttgtgaaagtgggtgcaaacggtgaggtggagacactg
gaacaaggtgaacttcagccgcaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggc
aaagatgtggatgtctctgtatatgactttgaagaggagcagcaggagggtttgttgtcc
gaggttaatgcagaaaaggtggtgggcaatatgaaaccaccaaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgcgagctgtgcagttacacttgtccacgtcgt
tccaacttggaccgccacatgaaaagccacaccgatgaaagaccacacaagtgccatctc
tgtggcagggctttccggacagtcacattgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacacacccacgagaaaccattcaaatgttccatgtgtgactat
gccagtgtggaggttagcaaattgaaacgccacatccgttcgcacaccggggagcgcccg
ttccagtgcagcctgtgcagctatgccagcagagacacctacaaactgaagaggcacatg
aggacccactccggagagaagccatatgaatgttacatctgccatgctcgcttcactcag
agcggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaattccac
tgtcctcactgtgataccgttatagcgagaaagagtgacctgggtgtccacttgcggaag
cagcattcctacattgagcagggcaaaaagtgtcgctactgtgacgctgtgttccatgag
aggtatgccctcatccagcatcaaaagtcccacaagaacgagaagcgcttcaagtgtgac
cagtgtgattatgcctgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagaaaagccttatgcctgtagccattgtgacaaaaccttccgccagaagcagctcctt
gacatgcacttcaagagataccacgatcccaactttgtccctgctgcctttgtctgctcc
aagtgtggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaatggaggagagacaaagaaaggcaaacgtggccga
aagagaaagatgcgttctaagaaagaagattcttctgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaggaggagacggcagtagaaattgaggctgaaccagaa
gttgagcaagaggctcctgcaccacctcccagtaagaaaagaagaggaagaccacctggc
aaagctgctgcgcaacccaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaacattatagttgaagtgaagaaagaacctgatgcagaaaca
gcagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga |
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